Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma20g01251 | ATGATGATCACAGAAGATGAAACAACTCTTACAACAGGCAAAGAACAACAAAGTGAAGTGATGAACGGAGACAAGGACAATCATGGAAGCGAAGATGGCAACCCCAAAGAGTGGTTGAACCTGAGCATAGGTGGAACTTCTTCACTATCAACATCTGGAGACACTGATTCACAAGCAAGACCACCAGCCACTGCCAAAGTTTTTTCATGCAACTTCTGCATGAGGAAGTTCTTTAGCTCACAAGCACTAGGAGGCCATCAGAACGCGCACAAGAGGGAAAGGggagctgccagaagataccaatctcagagatcgatggcaataatgggattctccatgaacacaCCAACTATGTTTCGATCACTTGGTGTTCAGCCCCATTCACTTGTGCACAAGCCACGCAGAGGTGGTGGTACCATGGTGACACCGGGCTTTCATGATGCAAATGCACATGCAAGACTTGGGATGGCATGGACACCTTTCTCGACCGAGGATCAAGCAGATATGGTGTGGCCAGGCAGCTTTCGCTTGGTTCCACGGGAGCCACTCAAGCTTGATTTAGGCCTAAGACTCTGA | 576 | 0.4323 | MMITEDETTLTTGKEQQSEVMNGDKDNHGSEDGNPKEWLNLSIGGTSSLSTSGDTDSQARPPATAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRSMAIMGFSMNTPTMFRSLGVQPHSLVHKPRRGGGTMVTPGFHDANAHARLGMAWTPFSTEDQADMVWPGSFRLVPREPLKLDLGLRL | 191 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma20g01251 | 191 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 70 | 90 | IPR013087 | - | |
Gma20g01251 | 191 | MobiDBLite | consensus disorder prediction | 40 | 61 | - | - | |
Gma20g01251 | 191 | PANTHER | ZINC FINGER PROTEIN 4-LIKE | 6 | 191 | - | - | |
Gma20g01251 | 191 | SUPERFAMILY | beta-beta-alpha zinc fingers | 65 | 94 | IPR036236 | - | |
Gma20g01251 | 191 | MobiDBLite | consensus disorder prediction | 19 | 33 | - | - | |
Gma20g01251 | 191 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 68 | 95 | IPR013087 | - | |
Gma20g01251 | 191 | PANTHER | ZINC FINGER PROTEIN 4-LIKE | 6 | 191 | - | - | |
Gma20g01251 | 191 | Gene3D | Classic Zinc Finger | 50 | 115 | - | - | |
Gma20g01251 | 191 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Gma20g01251 | 191 | MobiDBLite | consensus disorder prediction | 1 | 61 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma20g01251 | Gma-Chr20 | 39284351 | 39285515 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma20g01251 | 61 | 176 | C2H2 Transcription Factor Family | AT1G66140 | 37.931 | 1.82e-20 | 84.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma20g01251 | - | - | gmx:100811125 | 387.497 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma10g02459 | 10 | 52072723 | 52074193 | Gma20g01251 | 20 | 39284351 | 39285515 | GST |