Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01251 ATGATGATCACAGAAGATGAAACAACTCTTACAACAGGCAAAGAACAACAAAGTGAAGTGATGAACGGAGACAAGGACAATCATGGAAGCGAAGATGGCAACCCCAAAGAGTGGTTGAACCTGAGCATAGGTGGAACTTCTTCACTATCAACATCTGGAGACACTGATTCACAAGCAAGACCACCAGCCACTGCCAAAGTTTTTTCATGCAACTTCTGCATGAGGAAGTTCTTTAGCTCACAAGCACTAGGAGGCCATCAGAACGCGCACAAGAGGGAAAGGggagctgccagaagataccaatctcagagatcgatggcaataatgggattctccatgaacacaCCAACTATGTTTCGATCACTTGGTGTTCAGCCCCATTCACTTGTGCACAAGCCACGCAGAGGTGGTGGTACCATGGTGACACCGGGCTTTCATGATGCAAATGCACATGCAAGACTTGGGATGGCATGGACACCTTTCTCGACCGAGGATCAAGCAGATATGGTGTGGCCAGGCAGCTTTCGCTTGGTTCCACGGGAGCCACTCAAGCTTGATTTAGGCCTAAGACTCTGA 576 0.4323 MMITEDETTLTTGKEQQSEVMNGDKDNHGSEDGNPKEWLNLSIGGTSSLSTSGDTDSQARPPATAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRSMAIMGFSMNTPTMFRSLGVQPHSLVHKPRRGGGTMVTPGFHDANAHARLGMAWTPFSTEDQADMVWPGSFRLVPREPLKLDLGLRL 191
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01251 191 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Gma20g01251 191 MobiDBLite consensus disorder prediction 40 61 - -
Gma20g01251 191 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 191 - -
Gma20g01251 191 SUPERFAMILY beta-beta-alpha zinc fingers 65 94 IPR036236 -
Gma20g01251 191 MobiDBLite consensus disorder prediction 19 33 - -
Gma20g01251 191 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 95 IPR013087 -
Gma20g01251 191 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 191 - -
Gma20g01251 191 Gene3D Classic Zinc Finger 50 115 - -
Gma20g01251 191 MobiDBLite consensus disorder prediction 1 18 - -
Gma20g01251 191 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma20g01251 Gma-Chr20 39284351 39285515 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01251 61 176 C2H2 Transcription Factor Family AT1G66140 37.931 1.82e-20 84.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01251 - - gmx:100811125 387.497
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02459 10 52072723 52074193 Gma20g01251 20 39284351 39285515 GST