Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01247 ATGGAGGCCAAGAAGGAATATGAAGTGGACCATCTGACCACACTCACAGGGACCAGTTTCTCTCAGTTACTATTCGGAGATGACGACGACGATTATGATGAAAGTGCATTGGGACTCGCTGTGGACCAGTCTTACACCCGTTCACCTCTTTTCTCCATTCACAAGGCACCCCAAATGCTTTGTTTTGCCAAccatcaaaaccaaggtgacgttttgcttcctgaaaccaacgtaacccctcagaaatctgtcatcacttcTAGTGACTCCTCTTCTGCTAGCGCTTCCTCCTGCAACCACACCAACACCGCCTTCAATTCCTTACCTAAGTCTAATAGTTTGCAGAAAAAGCGAAATGGGATGGGGCAAGAATCAGTGACCAAGGTTGGTGTTGGAAGCCAGAGACAAACTAAGAAGAACAAAGCAGAGAACCCCACCTCAACCGGACATGCAAAGAGGAAGGAGAAGCTCGGGGAACGAATTGCAGCGTTACAACAGCTTGTTTCTCCCTTTAGCAAGACGGATACAGCATCTGTGCTTCACGAGGCAATGGGTTATATAAGATTTCTTCATGACCAAGTTCAGGTCCTATGCTCTCCTTACTTGCAAAGTTTGCCTTCCTCGTACCATCAAAATCAGCATGGGGACGGAGTTATCAATGAAGAGGAAGTGAACAAGGATTTGAGGAGTAGGGGTCTTTGCTTGATCCCTGTGGGATGCACCGTACACGTGGCAGGTAGCAATGGTGCTGATTTCTGGTCATCTGCCGCAATAGGGAACAATGTTAATTTCACCATCAGCCAAGCAGTGAAACGAAACCAAGATCAATGA 831 0.432 MEAKKEYEVDHLTTLTGTSFSQLLFGDDDDDYDESALGLAVDQSYTRSPLFSIHKAPQMLCFANHQNQGDVLLPETNVTPQKSVITSSDSSSASASSCNHTNTAFNSLPKSNSLQKKRNGMGQESVTKVGVGSQRQTKKNKAENPTSTGHAKRKEKLGERIAALQQLVSPFSKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQSLPSSYHQNQHGDGVINEEEVNKDLRSRGLCLIPVGCTVHVAGSNGADFWSSAAIGNNVNFTISQAVKRNQDQ 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01247 276 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 202 IPR036638 GO:0046983
Gma20g01247 276 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 141 190 IPR011598 GO:0046983
Gma20g01247 276 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 55 248 - -
Gma20g01247 276 CDD bHLH_AtbHLH_like 152 197 IPR045239 -
Gma20g01247 276 MobiDBLite consensus disorder prediction 82 155 - -
Gma20g01247 276 MobiDBLite consensus disorder prediction 82 144 - -
Gma20g01247 276 Gene3D - 132 212 IPR036638 GO:0046983
Gma20g01247 276 PANTHER BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED 55 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01247 Gma-Chr20 39248085 39249873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01247 152 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 56.731 2.39e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01247 - - gmx:100809317 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02464 10 52103301 52105287 Gma20g01247 20 39248085 39249873 GST