Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01241 ATGTTCCAGCATTTGGGTAACTCTAGATTTCCACTTGATGGCGTTTGCACAGTTGAAACCTCACCCTTCTTTGGCTCCTCTTCTTGCAGAACCACTCCCACGTTGCTCCGTCATAATGATAAAGCCAGAGATCCTACTTCTTTTTTGTTTCAGCCTCAACAAAGTTCCCCGCAACACTTTCAGGGTCTTGCTATGGCATTGCTATTTCTAATAGGATATGCAGTCATCATATTTGAAGAATATCTAGGGATCAATAAAAGTGGAGTGGGACTGTTGATGGCTGTAGGCTTGTGGGTGATACGGAGTATTTGGGCTCCATCAACTGATATAGCTGTTTCAGAGCTAACTCATGCATCTGCAGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATAGTTGACACTCATGGAGGATTTAAGCTGGTTACAGACAATATAACAACCCAAAACCCACGCCTTCTCCTATGGGTGATTGGATTTATTACATTCTTTCTCAGTTCAGTTCTAGACAGTCTGGCATCCACCATAGTCATGATTTCTCTGTTGCAGAAATTAGTACCTCTGTCAGAGTATCAGAAGATATTGGGAGGTGTTGTTGTAATAGCAGCAAATGCTGGTGGTGCATGGAGTCCTATTGGTGCTGTTACCACTACTATGCTGTGGATAAATGGCCAAGTATCTGCAGTGCAAACAATGAAGGGTTTGTTTTTACCTTCAGTCATTTCTCTAGTTGTTCCTCTGGTTCTGATGTCCTTGACTAGTGGAGTTAATGGGAAGGAACAAAGGTCTCTGGATGTCTTTGCCTCTGAACCGATTGCTCCTCGAGGGCAACTTGTTTTCTCAGTGAGTTTAGGAGCTTTGATTTTTGTCCCAGTGTTCAGGTCCCTCACAGGTTTACCTCCGTACATCGGAATGCTGCTCGGACTTGGCATGCTTTGGATTTTCGTTGATGCTATCCATTATGGTGAATCTGAAAGGCAGAAGCTAAAAGTGCCACATGCTCTGTCAAGGATAGACACTCAAGGAGCACTATTTTTCTTGGGAATTCTATTATCCGTTAGCAGCCTGGAGGTAGCAGGGATTCTTCGGGAAATAGCAAATTACTTTGATGCACATGTCCCAAGATGTGAACTGATTGCAAGTGCTATTGGACTAATATCTGCAGTAATAGACAATGTTCCATTGGTTGCTGCCACAATGGGAATGTATGATGTCTCTTCTTTCCCTCAAGATTCTGAGTTCTGGCAAATGATTGCATTATGTGCTAGTACTGGCGGATCCATATTAATTATTGGCTCAGCTGCTGGAGTTGCGTTCATGGGGATGGAAAAGGTGGACTTCTTTTGGTACTTACGGAAGGTTAGTGGCTTTGCCTTAGCAGGTTATGCTGCTGGTATTGCGGCCTATTTAGCGCTTCATAATCTCAACATCTTCCAACCAACACTTGCAGAGGTTCATTTCCTTTCTGGTTCTTAA 1494 0.4317 MFQHLGNSRFPLDGVCTVETSPFFGSSSCRTTPTLLRHNDKARDPTSFLFQPQQSSPQHFQGLAMALLFLIGYAVIIFEEYLGINKSGVGLLMAVGLWVIRSIWAPSTDIAVSELTHASAEVSEIVFFLLGAMTIVEIVDTHGGFKLVTDNITTQNPRLLLWVIGFITFFLSSVLDSLASTIVMISLLQKLVPLSEYQKILGGVVVIAANAGGAWSPIGAVTTTMLWINGQVSAVQTMKGLFLPSVISLVVPLVLMSLTSGVNGKEQRSLDVFASEPIAPRGQLVFSVSLGALIFVPVFRSLTGLPPYIGMLLGLGMLWIFVDAIHYGESERQKLKVPHALSRIDTQGALFFLGILLSVSSLEVAGILREIANYFDAHVPRCELIASAIGLISAVIDNVPLVAATMGMYDVSSFPQDSEFWQMIALCASTGGSILIIGSAAGVAFMGMEKVDFFWYLRKVSGFALAGYAAGIAAYLALHNLNIFQPTLAEVHFLSGS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01241 497 Pfam Citrate transporter 73 427 IPR004680 GO:0016021|GO:0055085
Gma20g01241 497 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 53 495 IPR045016 GO:0006814|GO:0015297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01241 Gma-Chr20 39208780 39214509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01241 61 497 Antiporters AT3G19490 78.995 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01241 - - gsj:114401198 839.336