Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01237 ATGAGCCTTAACTCTCAGAATCTACATTTGTGGTGGAGACTCTTATCCTTCCTTCTTCTACTTCTTCAATCTGTTACATCTCAATTTGTTACACCTCTTAACTCTGATGGGATTCACCTGCTTAAATTCAAATACTCCATCCTCAGCGACCCATTATCAGTCTTAAAGAACTGGAATTACGACGATGTAACACCATGTTCATGGCATGGTGTTGCATGCAGTGAAATTGGAGCCCCTGGTACCCCTGACTTTTTCAGAGTAACTAGCTTGGCCCTTCCCAATAGCCAGCTTTTGGGTTCCATTTCTGAAGACTTAGGCTTGATCCAATACCTTCGCCACATCGATCTTTCCAACAACTTCCTCAATGGCTCTCTACCCAACACTATCTTCAACTCTTCTCAACTTCAAGTACTTTCCCTCTCAAACAATGTTATCTCCGGTGAACTACCTCAGCTAATTGGTAAAATGACAAACCTTAAACTTCTCAACCTCTCCGACAATGCCTTTGCCGGTTTGATCCCAGAAAACCTCTCCACTTTACCAAACTTAACCATTGTTTCTTTGAAGAGTAACTACTTTTCTGGTAGTGTCCCTAACGGGTTCAACTACGTGGAGATTCTGGATCTGTCCTCCAATTTGCTCAATGGTTCTTTGCCAAACGAATTTGGCGGCGAAAGCTTGCACTACTTGAACCTCTCTTACAACAAAATTTCTGGAACAATACCGCCAGCATTCGTGAAACAGATTCCTGCAAACACAACAGTGGACCTCTCGTTCAACAATCTGACAGGGCCAATACCAGGATCTGAAGCTTTGCTCAACCAGAAGACAGAGTTTCTATCAGGAAATGCTGATCTCTGTGGTAAGCCTTTGAAGATTCTTTGCACTGTTCCCTCTACTATGTCCTCTGCTCCACCCAACGTCACCACATCTTCACCAGCCATTGCAGCCATACCAAAAACAATTGACTCAACCCCTTCAACAAACTCAACAGGAACCACCACCAGTTCTCAGAATGTCTCACAAAGTGGCCTAAAACCTGCCACCATAGCAGCGATTGTGGTAGGAGACTTAGCTGGCATGGCCCTTTTGGCCCTGATCGTTCTCTTCATCTACCAACAGAGAAAGAAAAGATATCCAAATCCAAAACTACACACTAATGCTTCTTCTGCCAACAACTCAGAAAAGAAACAAGAAACTGTTTCAAGACAAGATGCAGAGGCAAGAACTGTAACACCTTCACTTCCTTGTTCCTGCTTAACAATCAAAGAAGAAGAAACTTCAGAAGCAACAAGCTCCGACAGCGACTGTGAGAGCAGCACCGCAGTGGACATCATAGCAGCACAAAACAGGAACCTTCCGAAACACGGCACTCTTGTGACCGTGGACGGGGAGACAAATTTGGAGCTTGAGACTTTGCTTAAGGCTTCAGCGTATATTTTGGGAAACAGCCACGTCAGCATTGTTTACAAGGCGGTTCTGGAAGATGGAAGAGCCTTTGCTGTTAGAAGGATCGGTGAGTGTGGGATTGAGAGAATGAAGGACTTCGAGAACCAAGTCCGTGCCATTGCAAAGCTTCGCCATCCGAATTTGGTTAAGGTTCGTGGCTTCTGCTGGGGCCAAGAAGATAAACTCCTAATATGTGACTATGTCCCCAATGGCAGCCTCGCCACCATAGATCACAGAAGGGCAGGTGCATCCCCTTTGAACTTATCATTGGAGGTGCGGTTGAAGATAGCGAAAGGGGTGGCACGAGGGTTGGCTTTCATTCACGAGAAGAAACACGTGCATGGCAACGTTAAACCCAGCAACATTCTGTTGAACTCGGAAATGGAACCCATCATAAGCGATTTAGGGTTGGATCGGGTCCTCTTGAATGACGTAACCCACAAAGCAAACGGTTCGGCAAGGAAACAAGACCTGCCATTTGGTTCCATCCCCTTCTCAACAATGGGACCATCCACTAGCGGTGTGGGTCAAATGATGCACTATCAAGCACCAGAGTCACTTCTAAACGTCAAACCCAGCAACAAATGGGACGTGTACTCTTTTGGCGTGGTCTTGCTGGAGCTTCTAACTGGGAGGGTTTTCTCGGACCGTGAGTTGGACCAGTGGCACGAACCGGGTTCGGAGGAAGAGGAGAAAAACCGGGTCTTGAGGATAGCTGACGTGGCAATAAAGTCTGAAATAGAAGGGAGAGAGAATGTGGTATTGGCGTGGTTCAAGCTGGGGCTTAGCTGTGTTTCTCATGTCCCACAAAAGAGATCGTCCATGAAAGAGGCTCTACAAATCTTAGACAAGATCGCTGGTGCTGCTCCAGTCAATTAA 2328 0.4613 MSLNSQNLHLWWRLLSFLLLLLQSVTSQFVTPLNSDGIHLLKFKYSILSDPLSVLKNWNYDDVTPCSWHGVACSEIGAPGTPDFFRVTSLALPNSQLLGSISEDLGLIQYLRHIDLSNNFLNGSLPNTIFNSSQLQVLSLSNNVISGELPQLIGKMTNLKLLNLSDNAFAGLIPENLSTLPNLTIVSLKSNYFSGSVPNGFNYVEILDLSSNLLNGSLPNEFGGESLHYLNLSYNKISGTIPPAFVKQIPANTTVDLSFNNLTGPIPGSEALLNQKTEFLSGNADLCGKPLKILCTVPSTMSSAPPNVTTSSPAIAAIPKTIDSTPSTNSTGTTTSSQNVSQSGLKPATIAAIVVGDLAGMALLALIVLFIYQQRKKRYPNPKLHTNASSANNSEKKQETVSRQDAEARTVTPSLPCSCLTIKEEETSEATSSDSDCESSTAVDIIAAQNRNLPKHGTLVTVDGETNLELETLLKASAYILGNSHVSIVYKAVLEDGRAFAVRRIGECGIERMKDFENQVRAIAKLRHPNLVKVRGFCWGQEDKLLICDYVPNGSLATIDHRRAGASPLNLSLEVRLKIAKGVARGLAFIHEKKHVHGNVKPSNILLNSEMEPIISDLGLDRVLLNDVTHKANGSARKQDLPFGSIPFSTMGPSTSGVGQMMHYQAPESLLNVKPSNKWDVYSFGVVLLELLTGRVFSDRELDQWHEPGSEEEEKNRVLRIADVAIKSEIEGRENVVLAWFKLGLSCVSHVPQKRSSMKEALQILDKIAGAAPVN 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01237 775 SUPERFAMILY L domain-like 37 293 - -
Gma20g01237 775 MobiDBLite consensus disorder prediction 383 397 - -
Gma20g01237 775 PANTHER OS04G0122200 PROTEIN 28 770 - -
Gma20g01237 775 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 28 770 - -
Gma20g01237 775 CDD TM_EGFR-like 349 378 - -
Gma20g01237 775 SUPERFAMILY Protein kinase-like (PK-like) 480 767 IPR011009 -
Gma20g01237 775 Pfam Leucine Rich Repeat 111 129 IPR001611 GO:0005515
Gma20g01237 775 Pfam Protein kinase domain 480 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01237 775 Gene3D Transferase(Phosphotransferase) domain 1 551 772 - -
Gma20g01237 775 MobiDBLite consensus disorder prediction 382 409 - -
Gma20g01237 775 ProSiteProfiles Protein kinase domain profile. 475 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01237 775 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Gma20g01237 775 Gene3D Ribonuclease Inhibitor 203 297 IPR032675 -
Gma20g01237 775 Gene3D Ribonuclease Inhibitor 33 202 IPR032675 -
Gma20g01237 775 Gene3D Phosphorylase Kinase; domain 1 447 550 - -
Gma20g01237 775 MobiDBLite consensus disorder prediction 319 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01237 Gma-Chr20 39189425 39192431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01237 29 768 Receptor kinase-like Gene Family AT2G15300 51.706 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma20g01237 Pkinase 2.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01237 - - gmx:102667237 1449.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02470 10 52136723 52140253 Gma20g01237 20 39189425 39192431 GST