Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01223 ATGTTCCAGCATTTGCATAATTCTAGACTTCCACTTCATGGCTTCTGCACCGTTGAATCATCACCCTTCTTTGGCTCCTCTTCCTGCAGAATCTGTTTCACAGGTACCCTCCCCACGTTGCTCCGTCACAATGTATTGGCACGTGCCGAAGATAAGGCCAGAGACCCTACACCTTCTTCCTTTCAGCCTCAACAAAGCTCACAGCAACAGTTTCAGAACTTGACACCAGAATCTGGGAGTTGTGATCCCCTATGTTCACTCGATGAAACTAGCTCACAAGAGTTTGAAGACAGCTACCAGCCCAAGACTGATTTCCTCAAAGCTGTTGCAATATTAGCAGCAGCTGCAACTGGAGCACTGACAATTAACCATTCATGGGTGGCCACTAATCAGGATCTTGCTATGGCATTGCTATTTGTAATAGGATATGCAGGCATCATATTTGAAGAATCTCCAGCCTTCAATAAAAGTGGAGTGGGACTGTTGATGACTGTAAGCTTATGGGTGATACGGAGTATTGGGGCTCCATCAACTGATATAGCTGTTTCAGAGCTTACACATGCATCTGTGGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATTGTTGATGCTCATCAAGGATTTAAGGTGGTTACTGGCAATATAACAACCCAAAACCCACGCCTTCTCTGGATGTTCATCATTATCATTATTGCTCCTCGAGGACAGCTTGTTTTCTCTGTGGGTTTAGGAGCTTTGATTTTTGTCCCAGTATTCAAGGCTCTCGCAGGTTTGCCTCCATACATGGGGATGCTGCTTGGACTCTGTGTGCTTTGGATCCTTACAGATGCTATCCATTACGGTGAATCTGAAAGCCTGGAGGCAGCTGGGATTCTTCGGGAAATAGCAAACTACCTTGATGCACACGTGCCAAGTAGTGAACTGATTGCCAGTAGTATTGGACTCATATCTGCACTAATAGACAATGTTCCATTGGTTGCTGATGGGAATCTGCTGGAGTTGCGTTCATGGAGGATGGAAAAGGTGGACTTCTTTTGGTACTTACGAAAGATTAGTGGCTTTGCTTTTGCAGGTTATGCTGCTGGTATTGTTCCATATTTAGCGCTTCATAACCTCAACATCTCTCTACCAACTCTAGCGGAGGTTCCTTTCCTTTCTGGTTCATAA 1188 0.447 MFQHLHNSRLPLHGFCTVESSPFFGSSSCRICFTGTLPTLLRHNVLARAEDKARDPTPSSFQPQQSSQQQFQNLTPESGSCDPLCSLDETSSQEFEDSYQPKTDFLKAVAILAAAATGALTINHSWVATNQDLAMALLFVIGYAGIIFEESPAFNKSGVGLLMTVSLWVIRSIGAPSTDIAVSELTHASVEVSEIVFFLLGAMTIVEIVDAHQGFKVVTGNITTQNPRLLWMFIIIIIAPRGQLVFSVGLGALIFVPVFKALAGLPPYMGMLLGLCVLWILTDAIHYGESESLEAAGILREIANYLDAHVPSSELIASSIGLISALIDNVPLVADGNLLELRSWRMEKVDFFWYLRKISGFAFAGYAAGIVPYLALHNLNISLPTLAEVPFLSGS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01223 395 PANTHER BNAC03G40960D PROTEIN 345 395 - -
Gma20g01223 395 PANTHER BNAC03G40960D PROTEIN 238 291 - -
Gma20g01223 395 PANTHER BNAC03G40960D PROTEIN 292 335 - -
Gma20g01223 395 PANTHER BNAC03G40960D PROTEIN 39 233 - -
Gma20g01223 395 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 238 291 IPR045016 GO:0006814|GO:0015297
Gma20g01223 395 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 292 335 IPR045016 GO:0006814|GO:0015297
Gma20g01223 395 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 39 233 IPR045016 GO:0006814|GO:0015297
Gma20g01223 395 MobiDBLite consensus disorder prediction 52 79 - -
Gma20g01223 395 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 345 395 IPR045016 GO:0006814|GO:0015297
Gma20g01223 395 MobiDBLite consensus disorder prediction 57 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01223 Gma-Chr20 39091158 39095755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01223 238 395 Antiporters AT3G19490 55.204 9.44e-57 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01223 - - gmx:100779521 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02482 10 52218880 52224199 Gma20g01223 20 39091158 39095755 GST