Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01189 ATGTCCATCCTACGCCGCCTCCACCTAAACCTTTGCACCACCACCCGCCGCCGCCGCCTTGCCACCGCTTCCGCCGCACTACGCCAGGACACCACCGTCTGGACCCCGGCCCCTCTCTCCAAGGTCGAGCACGCCGCCGAGTCCCTCTTCCACATCGCCATCGACGTCTCCGACGCGCCCGATCACGCCGCGTCCCACACACTCGCCGGGCAGTACCTCCAGCTCCGCCTCCCCGACGCGCTCAAGCCCTCGTTTCTGGCCATCGCGTCGCCGCCGAAGCTCGCCGCGGCGCGTGGAGTGTTCGAGTTTCTGGTAAAGAGCGTGGCGGGGTCCACCGCGGAAGCGCTGTGCGCGTTGAAGAGAGGGGATGTGGTTGAACTCAGCCAAGTCATGGGAAACGGATTCAACATCGATCGGATCCACCCTCCGAAGAATTTTGGAACCGTTCTCGTCTTCGCCACTGGATCTGGAATTAGTCCAATTCGGTCGCTTATTGAGTCAGGATTTGATGCTGCGAAGAGGTCTGATGTGAGACTATATTATGGGGCCAGGAACCTTCAGAGAATGGCTTATCAGGATAGGTTTAAAGATTGGGAATCTTCCGGTGTGAAGATTGTGCCTGTATTGTCTCAACCAGATGAGAGTTGGACTGGGGAAAGTGGCTATGTTCAGGCTGCATTTTCAAGAGAGAAGCAAATATCTGACCCACTGGCAACTGGTGCTGTACTTTGTGGACAGAAACAGATGACCGAGGAAGTGACATCAATTCTTGTTGCTGCTGGAGTATCCGCTGATAAGATATTGAAGAACTTCTGA 816 0.5613 MSILRRLHLNLCTTTRRRRLATASAALRQDTTVWTPAPLSKVEHAAESLFHIAIDVSDAPDHAASHTLAGQYLQLRLPDALKPSFLAIASPPKLAAARGVFEFLVKSVAGSTAEALCALKRGDVVELSQVMGNGFNIDRIHPPKNFGTVLVFATGSGISPIRSLIESGFDAAKRSDVRLYYGARNLQRMAYQDRFKDWESSGVKIVPVLSQPDESWTGESGYVQAAFSREKQISDPLATGAVLCGQKQMTEEVTSILVAAGVSADKILKNF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01189 271 Pfam Oxidoreductase NAD-binding domain 153 253 IPR001433 GO:0016491
Gma20g01189 271 Gene3D - 147 271 IPR039261 -
Gma20g01189 271 Gene3D Translation factors 27 132 - -
Gma20g01189 271 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 32 137 IPR017927 GO:0016491
Gma20g01189 271 PANTHER - 2 271 - -
Gma20g01189 271 CDD FNR_like 40 268 - -
Gma20g01189 271 SUPERFAMILY Riboflavin synthase domain-like 34 134 IPR017938 -
Gma20g01189 271 PRINTS Phenol hydroxylase reductase family signature 67 79 - -
Gma20g01189 271 PRINTS Phenol hydroxylase reductase family signature 150 169 - -
Gma20g01189 271 PRINTS Phenol hydroxylase reductase family signature 175 184 - -
Gma20g01189 271 PANTHER F9L1.8 PROTEIN 2 271 - -
Gma20g01189 271 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 143 268 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01189 Gma-Chr20 38773045 38776048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01189 70 265 NADPH P450 reductases AT5G17770 25.714 3.71e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01189 - - gmx:100790250 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02517 10 52502963 52506091 Gma20g01189 20 38773045 38776048 GST