Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01181 atggagcaagagaattacaaaatcaaggcagtgaatttgcttcgaagcagaatctgtGATCCCAAATTCATCTTCATCAATGAATCTCCAGAAAGCAACCACAGCAAGCTGAAATTCATGATATCGAGTTCGGTGACGGAGGCGTGCAACAATTCTATTCTTCTTCTCGGTCCCCGCGGCTCTGGCAAGAATGCGGTTTTGGAACTTGTCATTCAAGATTTGCTGCAAGAATATCCGGACTCGATCTCAGTGATGAGGTTGAACGGGCTTTTACATAGTGATGACATCTCTGCGTTCAAGGAAATAGCTAGGCAGTTATGCATGGAGCATCAATTGCTATTCTCAAAAGCGGCATCATTTGATGACAACTCCCAATTTATGGTGGCCATGCTAAAGGAATGTGGATTAGCACATAaaacaataatttttgttttggatgagtttgacctgtttgctcagGGTAAACAGAGATTACTCTATAGCTTGCTAGATGCAATGCAATCAATAACATCACAGGCTGTTGTACTTGGCATTAGTTGTCGTCTGGATGCAGATCAGCTGTTGGAGAAAAGGGTACGATCCCGTTTTTCACATAGAAAGCTGTTGTTCCTACCACCTTCAATAGAAGATTCACAAAAGTTACTGATGCACATGCTGACATTACCAATTGATCCAAGCTTTCCACAAGATTATGCTGTTGAATTTAACAGGAAGGTCCAAAATATTATAGAAGATAGAGGGTTCCTAGAAACCCTCAATAAATATTTAAATGTTGACTCCTCTGTCAAACATTTACTGAGGTTCTTATTCTGTGCAGTCTCTCGTATGGAATTGCAGACTGGGTTCCTGTCTCGGGAGAACTTTGAAATTGCATTTTCAAGTATCCAGAGGCAGCCCAAACTGGAATGTTTAAGAAATTGCTCCATTTTAGAACTTCAAATTTTGGTTTGCATGAAGAGATTGGAAGTTAAAGAGCAAAACTTATGCAACTTCAATTCTGTAATGAAAGAGTATAAAAGCACCCTGACTTCTGAACGTTATGCAAGACATGTCTGCTTAAGGGCATTTGAACACCTTATACATCGTGAATTGATATGTTTCACAGACAATAGAGGACAAAGTTTGTCTGTTGAATTTCGTCCTGTAAAGCTTTTAATTTCATCTGCTGAACTACATCAAGGACTAAGAGCAAATAATTCATGCCCTCCTAAGCTTCTAAACTTAATGGATCGTGAAGGCTAA 1242 0.3655 MEQENYKIKAVNLLRSRICDPKFIFINESPESNHSKLKFMISSSVTEACNNSILLLGPRGSGKNAVLELVIQDLLQEYPDSISVMRLNGLLHSDDISAFKEIARQLCMEHQLLFSKAASFDDNSQFMVAMLKECGLAHKTIIFVLDEFDLFAQGKQRLLYSLLDAMQSITSQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFLPPSIEDSQKLLMHMLTLPIDPSFPQDYAVEFNRKVQNIIEDRGFLETLNKYLNVDSSVKHLLRFLFCAVSRMELQTGFLSRENFEIAFSSIQRQPKLECLRNCSILELQILVCMKRLEVKEQNLCNFNSVMKEYKSTLTSERYARHVCLRAFEHLIHRELICFTDNRGQSLSVEFRPVKLLISSAELHQGLRANNSCPPKLLNLMDREG 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01181 413 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 214 393 IPR032705 -
Gma20g01181 413 Pfam AAA ATPase domain 36 168 IPR041664 -
Gma20g01181 413 Gene3D - 31 205 IPR027417 -
Gma20g01181 413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 262 IPR027417 -
Gma20g01181 413 PIRSF ORC4 1 412 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Gma20g01181 413 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 9 412 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Gma20g01181 413 CDD AAA 51 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01181 Gma-Chr20 38717701 38722332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01181 1 410 Core DNA Replication Machinery Family AT2G01120 63.121 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01181 K02606 - gmx:100799734 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02525 10 52557272 52561437 Gma20g01181 20 38717701 38722332 GST