Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01171 ATGGAGAAGGTTTGTGAATTCTGCACAGCTTTGAGGCCACTTGTTTACTGTAAGGCTGATGCAGCATATCTTTGTCTATCCTGTGATTCAAAGGTGCATTTAGCAAATGCAGTGTCTGGTCGGCACCTCCGGAACTTTGTGTGCCACTCATGCGGATACCATCTTGCTTATGTTCTGTGTTTGGAACATAAAATGTTGATCTGTCGTGACTGTGATCAAAAGTTGCATAACATTTCTTTACCACATAAGAAACGAGCTATCAGAAGTTTCATGGGCTGCCCTTCTGCTAAAGACTTTGCAGCACTCTGGGGGTTTGAATCGAATGAGATTGAAAACAGTGCCACTCAGGATCAGTTTGGTTCAGTTTCTTGTGTTTCTGCAGATTTGAATGTTGCACAAGTTTCAGGAAAGCCTGGCATTCAAACTGGGATCCCCTCAATGCCATCTGGAGCCAAATTTGATGGGGGAGGATCAACCAGTCAACAAGGTCAGATATTGTACAGTGATCAAGAGCGACAAACTATTCTGCAGCAGATTATTGATTTAAAAATGCTTCAACAAAATGAGGACATTGATTATCTTGCAAAGATCAATAGGCTACAAGAAAAAGATTTATCTCCTTCAGTATATCACACTCTTAAGAAATTGGACGACAAATTCAATGAGCAAGCACAAAAGTCCCAGGATCTTGCTACTAATGTTCTGGAAAAAGACTGTCCCACTGTGGAGCTGAATCCTGAAACTTTGCCTTCTACGTTTTCTCAATTTGACAATTTATATTCTTCTTCAATTATCGATCTTCCCTTGCATGGAGAGTTGTTCTGGACATGCCGAAGTCCACTTCAAAGTAATCAGTTGTGGTCCCAAAATATTCAAGACCTTGGGATATGCAAAGAACTTGTTTGTCAAGACGATTTTAACATCCCTGATGTTGACTTAACTTTCCAAAACTTTGAGGAACTATTTGGAGGAGATCAAGATTCAATTAGAATACTGCTTGATGATCAAGATGTCTCCTGCTCTTCTTTAGAGAAGGATAAGTCAGTTGGCAAGTCAGATATTGACAATCCAAGTGCAATGGAGGAATCTTCTGCAGCTGCGTCTATTACTATCTCCCAATCTGATCTTGACAATAAGGATATGAATCCTCTCAGCCAGTACCGTCCAAGAAGCATGGATCCCGCCCTTGCAATTCGACCATTTGATTCAACCATACCATTCTCCGTTTTGAGATTCAATGAGGAAAGCAGTTGCACTAGCCATGATGACAGTGCCCTTTCTCCCTACAGTGAAAGGAAGGCTTATTCAGGTAGTTAA 1317 0.41 MEKVCEFCTALRPLVYCKADAAYLCLSCDSKVHLANAVSGRHLRNFVCHSCGYHLAYVLCLEHKMLICRDCDQKLHNISLPHKKRAIRSFMGCPSAKDFAALWGFESNEIENSATQDQFGSVSCVSADLNVAQVSGKPGIQTGIPSMPSGAKFDGGGSTSQQGQILYSDQERQTILQQIIDLKMLQQNEDIDYLAKINRLQEKDLSPSVYHTLKKLDDKFNEQAQKSQDLATNVLEKDCPTVELNPETLPSTFSQFDNLYSSSIIDLPLHGELFWTCRSPLQSNQLWSQNIQDLGICKELVCQDDFNIPDVDLTFQNFEELFGGDQDSIRILLDDQDVSCSSLEKDKSVGKSDIDNPSAMEESSAAASITISQSDLDNKDMNPLSQYRPRSMDPALAIRPFDSTIPFSVLRFNEESSCTSHDDSALSPYSERKAYSGS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01171 438 MobiDBLite consensus disorder prediction 357 385 - -
Gma20g01171 438 MobiDBLite consensus disorder prediction 344 389 - -
Gma20g01171 438 SMART bboxneu5 1 47 IPR000315 GO:0008270
Gma20g01171 438 SMART bboxneu5 48 87 IPR000315 GO:0008270
Gma20g01171 438 MobiDBLite consensus disorder prediction 416 438 - -
Gma20g01171 438 CDD Bbox1_BBX-like 4 44 - -
Gma20g01171 438 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 422 - -
Gma20g01171 438 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 422 - -
Gma20g01171 438 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01171 Gma-Chr20 38554506 38563013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01171 1 329 C2C2-CO-like Transcription Factor Family AT1G68190 36.637 7.99e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01171 - - gmx:100796028 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02535 10 52662716 52677866 Gma20g01171 20 38554506 38563013 GST