Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01166 ATGGAGGCGCAACCGCCAACCCCCTCGACCGCCCCGCCGCCTCCGCCGCAGCACCTCAGCTACCCCGACTCCGTGGAATCCTCGCCACGCTCCCGCAACACCGACTCCTGGGACGAGCCCTTCGCGCCGGCGTCGACGAAGCTCCGCCTCATGTGCAGCTACGGCGGCCATATCGTCCCCCGCCCCCACGACAAGTCCCTCTGCTACGTCGGCGGCGACACGCGCATCATCGTCTCCGAACGCGCCACCTCACTCGCGGAcctctccacgcgcctctcgaaaacattcctgaatggaagacccttcacgctcaagtaccagctccccaacgaggacctcgattccctcatctccgtcaccaccgacgaggacctcgagaacatgatcgacgagtatgacCGCACCGCCGCCGCCGCCACCTCCGCCGTCAAACCCTCTCGCATCCGCCTCTTCCTCTTCCCCACCAAACCCGAATCCACTCACTCTATCCCTGCCCAAATTCTCGACACGTCAGCCAAATCGGACGATTGGTTTTTGAATGCTTTAAACGGCGCCGGATTGCTTAACCGCGGGTTTTCGGACTCTGCCTCTGTTAATTGCCTTCTTGGACTTGACGACGAGGTTGCCGGGAACAACCTCGAACCCGGTTCGAAGGACGGTGTGGATGGTGGTGTTGGCGGTGGTGGTGCTTCGCAGGGTGGATCTTTCGGGAACGGGAAGAATTTGAAGCAGGATGTTCACTCCGTTCCTGATTCGCCCATGCTCGAAACGACGTCGTCGTTTGGGTCCACTTCCTCGTCGCCTTCGCTCGCGAACTTGCCGCCGATTAGGGTTCATGTCGTGGAGGATCAGAGGGTGTTGGGGATTGAGGATCAGTTCGCGCAGATAGGGGTTGGTGTGGGGCCGAAGCAGCAGCCGGATGAGGGTTTTGTTTTGCTCTCTTCGCCGCCTCCGCCGCCGGTTCCCGCGACTCTCGCCGCGGTGGGTGTGCCGATTGGGCCCGCCACGGTGGTTGCTGGGGAGCATCATAACCGCGTTGTCTCCGATGATGAGAGATCGGACCATGGGGTTCCTGTTGGGTATAGAAAACCACCCACTCCTCAACCACAGGTTCAGTCACAGACACAAGCACAGTCACAGGCACAAACGCAAACACTTGCTCCTCAATTTCATCAGAAGTCAACTGCTGGTGGCGCCGTTGTTGATTTGCCTTCTCCTGATTCAGTTTCTAGTGATAGTAGCCTTGCGAATGCAATCTCGCGTTCAAAAGCTGCTGTATATCAAGAACAAGCTCAGATTCAACCTGGCACTACAAGGGTTCCTAGTAACCCTGTGGATCCGAAGCTTAATGTGTCTGATCTGCATGGTCGGATCCAGATGCAGCAACATGTACATGACCCCGGATATTTgttgcaacagcaatttgaacagcaccagcagctgcaatcacaacagcaacagcaatttgaacagcaccagcagctgcaatcacaaccgcaacatcaatttgaacagcaccaacaccaacaccaacagacactgccgcaacagcagcaacagTTTATTCATGGCGCACACTTTATTCACCATAACCCTGCTATTCCTGCATATTATCCTGTATATCCTTCCCAGCAACATCCCCAGCATCCCCAGGTTTACTATGTGACCGCGAGACAGGCGCAGGCTTACAACCTGCCTCTGCAGCAGGCTAATATGGGCGAGTCTGCAGGGAACATCGCTTCTAGCCGGCCACAAACTCCACCAAATCCTTCTACATTGGTTCAACAGCCTGCTACTTACAACCCTATTAGAAATGCTCCCATGCCtaaaactgaaatgaatgcttacagagctgcaactgcaggcaaccctcaactagttcAAGTTCCTACAAGCCAACATCAGCAGCAATATGTCACCTACTCACAGATTCACCATCCTTCTCAGTCCATGGCTCCCAATTCTGCTGCCCCTGCGAATTATGCTTTTGATTATGCGGATCCTGCTCATGCTCAAATATACTACTCTCAACCTATGGCACCCACAATTCCTTCACAGTACCAGACTATGACTGCTGCTGCTGTGATGATGCAGGAAGGTTCAGCTCAGCATCCCTCAGACAGCGTGAAGCAGCAGCAGCAGATAAGAACCTCACAACCATTATAA 2166 0.4649 MEAQPPTPSTAPPPPPQHLSYPDSVESSPRSRNTDSWDEPFAPASTKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIIVSERATSLADLSTRLSKTFLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTAAAATSAVKPSRIRLFLFPTKPESTHSIPAQILDTSAKSDDWFLNALNGAGLLNRGFSDSASVNCLLGLDDEVAGNNLEPGSKDGVDGGVGGGGASQGGSFGNGKNLKQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVVEDQRVLGIEDQFAQIGVGVGPKQQPDEGFVLLSSPPPPPVPATLAAVGVPIGPATVVAGEHHNRVVSDDERSDHGVPVGYRKPPTPQPQVQSQTQAQSQAQTQTLAPQFHQKSTAGGAVVDLPSPDSVSSDSSLANAISRSKAAVYQEQAQIQPGTTRVPSNPVDPKLNVSDLHGRIQMQQHVHDPGYLLQQQFEQHQQLQSQQQQQFEQHQQLQSQPQHQFEQHQHQHQQTLPQQQQQFIHGAHFIHHNPAIPAYYPVYPSQQHPQHPQVYYVTARQAQAYNLPLQQANMGESAGNIASSRPQTPPNPSTLVQQPATYNPIRNAPMPKTEMNAYRAATAGNPQLVQVPTSQHQQQYVTYSQIHHPSQSMAPNSAAPANYAFDYADPAHAQIYYSQPMAPTIPSQYQTMTAAAVMMQEGSAQHPSDSVKQQQQIRTSQPL 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01166 721 MobiDBLite consensus disorder prediction 1 40 - -
Gma20g01166 721 MobiDBLite consensus disorder prediction 366 392 - -
Gma20g01166 721 Gene3D - 67 153 - -
Gma20g01166 721 MobiDBLite consensus disorder prediction 1 20 - -
Gma20g01166 721 Pfam PB1 domain 63 154 IPR000270 GO:0005515
Gma20g01166 721 MobiDBLite consensus disorder prediction 21 40 - -
Gma20g01166 721 ProSiteProfiles PB1 domain profile. 47 155 IPR000270 GO:0005515
Gma20g01166 721 MobiDBLite consensus disorder prediction 698 721 - -
Gma20g01166 721 SMART PB1_new 62 153 IPR000270 GO:0005515
Gma20g01166 721 SUPERFAMILY CAD & PB1 domains 63 163 - -
Gma20g01166 721 MobiDBLite consensus disorder prediction 475 517 - -
Gma20g01166 721 CDD PB1_UP2 51 153 - -
Gma20g01166 721 PANTHER EXPRESSED PROTEIN 9 710 - -
Gma20g01166 721 MobiDBLite consensus disorder prediction 251 272 - -
Gma20g01166 721 MobiDBLite consensus disorder prediction 575 597 - -
Gma20g01166 721 PANTHER OS05G0427100 PROTEIN-RELATED 9 710 - -
Gma20g01166 721 MobiDBLite consensus disorder prediction 213 272 - -
Gma20g01166 721 Coils Coil 478 498 - -
Gma20g01166 721 MobiDBLite consensus disorder prediction 345 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01166 Gma-Chr20 38483321 38486042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01166 44 261 MAP Kinase Kinase Kinase AT1G79570 33.186 7.45e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01166 - - gmx:100784396 1213.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02541 10 52748273 52750589 Gma20g01166 20 38483321 38486042 GST