Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01153 ATGGGTTCAGTTTATGAATTAGTATTAttgcttttattttgtggccttatgccacttgtcttggcggctgggaaccaagcagagtgtccaccttcgtttccatgtggatatcttgacaatatcagtttcccattcactctaactgaacgcccggactgtggcttattgcccattcgcaattgtgatgatccacttaagcacaaaatgatccaattacagaaaaatggagaatggtttcagcttgtacgcgttgctcagcttttcagtagtcctactactcctctcacaacttttcaatttagagacacaaatctctatcaccttctgcagaacgaaagttgtgaagcttttggaaacaattatactcttcctcatagttctggctttgctgcttctctttatatccaatacaacacaactctgttcaggtgcaaccgcagcctccatgtcagccctcccacaaacatgtctcattatacaaagtgccctgattacgatctctactacaacatcacagcagctgaagatgcgtctttgagagcatgtacaaaggtcctgcttccaattaaagacgtgcctgacgctaacaacccattcacattcgtaactgcagatatcttaactaaagtagcattaaccgatgaacgtgcagcttgccactatcgcagaggagggcagtgtcaacttgacagcagagagaaattttgttgtaccaacgTTATAAAAAAAGGGTCGAGTTTGAAACTGGTTATAGgtattggaatcccaagcatgttggcaattgggttgctgtttctctttctactctacaaacgaaaatatgctacctcaggcggacaattgGAGTCAAGAGATTCTTATTCTGATTCCTCCTCAAATCCTCATCGAGAAACTAGTAGCGAGTACTTTGGAGTTCCACTCTTCTTGTATGAGCAGCTTAAAGAAGCAACAAATAATTTCGACCATACTAAAGAACTTGGTGATGGAGGCTTCGGTACTGTGTACCATGGGAAACTCCCAGATGGACGTGAAGTTGCCGTGAAGCGCTTATACGAGCACAACTGGAAGCGAGTAGAACAGTTCATGAACGAAGTCAAGATCCTCACACGTTTGCGTCACAAATATCTTGTGTCACTCTATGGCTGCACTTCACGGCACAGCCGTGAACTCCTGCTCGTGTATGAATACATTTCAAATGGCACTGTAGCATGTCATCTCCACGGAGAATTAGCGAAGCCTGGCTCGCTACCGTGGTCTATACGAAtgaaaattgccatagagactgctattgcattgacttatctccatgcctctgacatcattcaccgtgacgtgaaaacaaacaacattctccttgacaacaacttttgtgttaaggtagccgattttgggctttcaagaGACTTTCCCAACAATGTCACACATGTCTCCACAGCTCCACAAGGGTCCCCGGGTTACCTTGACCCTGAATATTACAATTGTTATCAGCTTACTAGTAAGAGTGATGTGTATAGTTTTGGAGTTGTGCTTATTGAGCTAATATCATCCAAGCCTGCAGTTGATATGAACAGGAGCAGGGATGAGATTAACTTGTCAAATCTAGCCGTGAGGAAGATTCAAGAAAGTGCAATTAGTGAGCTGGTTGATCCTTCTCTTGGTTTTGATTCAGATAATGGGATTAAGGGGATGATAGTTTCAGTGGCAGGGTTGGCTTTTCAGTGTTTGCAAAGGGAAAAGGACTTGAGACCTTCTATGGATGAAGTGTTGGATGAACTGAGGAGAATTGAGAGTGGGAAGGATGAGGGAGAGGTTCAAGATGAGGGTGATGTTAATGGTGCTGCAGTTTCACATAGTTCTGCACATTCACCACCACCAGCCTCACCTGAGTGGGAAGAAGTTAGATTGTTGAGGAATATAAAGCCTACATCCCCAAACACTGTCACTGATAAATGGGAAAGTAAATGTACTACCCCTAATATCAGTGGTTAA 1989 0.2328 MGSVYELVLLLLFCGLMPLVLAAGNQAECPPSFPCGYLDNISFPFTLTERPDCGLLPIRNCDDPLKHKMIQLQKNGEWFQLVRVAQLFSSPTTPLTTFQFRDTNLYHLLQNESCEAFGNNYTLPHSSGFAASLYIQYNTTLFRCNRSLHVSPPTNMSHYTKCPDYDLYYNITAAEDASLRACTKVLLPIKDVPDANNPFTFVTADILTKVALTDERAACHYRRGGQCQLDSREKFCCTNVIKKGSSLKLVIGIGIPSMLAIGLLFLFLLYKRKYATSGGQLESRDSYSDSSSNPHRETSSEYFGVPLFLYEQLKEATNNFDHTKELGDGGFGTVYHGKLPDGREVAVKRLYEHNWKRVEQFMNEVKILTRLRHKYLVSLYGCTSRHSRELLLVYEYISNGTVACHLHGELAKPGSLPWSIRMKIAIETAIALTYLHASDIIHRDVKTNNILLDNNFCVKVADFGLSRDFPNNVTHVSTAPQGSPGYLDPEYYNCYQLTSKSDVYSFGVVLIELISSKPAVDMNRSRDEINLSNLAVRKIQESAISELVDPSLGFDSDNGIKGMIVSVAGLAFQCLQREKDLRPSMDEVLDELRRIESGKDEGEVQDEGDVNGAAVSHSSAHSPPPASPEWEEVRLLRNIKPTSPNTVTDKWESKCTTPNISG 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01153 662 Pfam Protein tyrosine and serine/threonine kinase 323 588 IPR001245 GO:0004672|GO:0006468
Gma20g01153 662 MobiDBLite consensus disorder prediction 639 662 - -
Gma20g01153 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Gma20g01153 662 MobiDBLite consensus disorder prediction 595 662 - -
Gma20g01153 662 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Gma20g01153 662 ProSiteProfiles Protein kinase domain profile. 320 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01153 662 Gene3D Phosphorylase Kinase; domain 1 291 396 - -
Gma20g01153 662 SUPERFAMILY Protein kinase-like (PK-like) 294 592 IPR011009 -
Gma20g01153 662 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 20 661 IPR044652 -
Gma20g01153 662 MobiDBLite consensus disorder prediction 280 299 - -
Gma20g01153 662 SMART serkin_6 320 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01153 662 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 20 661 - -
Gma20g01153 662 Gene3D Transferase(Phosphotransferase) domain 1 397 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01153 Gma-Chr20 38362912 38366522 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01153 33 662 Receptor kinase-like Gene Family AT1G25390 47.022 3.93e-175 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma20g01153 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01153 - - gmx:100305407 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02551 10 52843428 52847065 Gma20g01153 20 38362912 38366522 GST