Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01152 atggctctagttgatttgttctgcttcctcttgttttgtcaccttgtactcattctctccgctggttatggaaatgggcaccaagattgtccacactcctttacttgtggtaatcttggaactttccattaccctttcaccaaggcagaaaaacctgactgtggcttgctagccatacatgattgtgataatcctcatcaacacagaaaaatgattcagctcgagaaaaatggaaaaggcatagtgcttacaggcgtggctcagcagaatgcgatttcaattttggatgaagattttcacaagcgtttacaacaaaacccttgtggcactttgaagaataattatagtcttccttcccctttttcttctttgtattctattcacataaaattcaatgtaacactgttcaaatgcaaacaaagcctcaaaatgaaaccgccaacacattattttaatcacccgtgccctgaatatgattatgatatatattatgacagccttcccactcctaatagtaaggaggcgcatagccttttctcatcctgctcagttattcagatatcatcaaaagacttgactgataccaatgacattctgtcgtttgtatctgctgagatggttcttcaagtagtattatctaatgattgtgaccagtgctataatcacaggggaggccaatgtcggcttgacgccaataaaaagttctactgtaaagaaggaccaaagaataagagtagtaaaagtttgaagctgatacttggacttgtaacaggtttaagtgttatattgtcagctattctgatcattggatacatagtatttagacggaaatatactccatcacacccccaatcccaatcaaGAAACACATATGTTGATGTAATTGGTCCGAGCTCAAATCCTGATCCAGAAAACGGCAGGTTCTACTTTGGAGTCCCTCTCTTCTCTTACAAGGAGCTTCAAAAAGCTACATATAATTTCCACCACGCCAGACAACTTGGAAGTGGAGGCTTTGGAACAGTTTACTATGGAAAACTGCAAGATGGACGAGAAGTTGCTATCAAGCGTCTATATGAGCACAACTACAGGCGAGTAGAACAGTTCATGAACGAAGTTCAAATCCTCACACGCTTGCGCCATAAAAATCTGGTGTCCCTCTATGGCTGCACTTCAAGTCACAGCCGTGAACTACTCCTTGTGTATGAGCATGTTCCAAATGGCACTGTTGCTTGCCACCTCCACGGTGAGTTAGCAAGGCGCGACACTCTTCCATGGCACACAAGAATGAAAATTGCCATAGAGACCGCAAGTGCACTGTCTTATCTCCATGCTTCTGACATCATCCACCGCGATGTCAAGACCAAAAACATTCTCCTTAACGAAAGTTTCAGTGTTAAGGTTGCGGACTTTGGTCTTTCAAGGTTGTTCCCTAACGATGTTACGCATGTTTCCACTGCTCCACTAGGAACCCCAGGTTACGTTGATCCAGAATATCACCAATGCTACCAGCTCACAAACAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTTATTGAGCTATTATCATCTATGCCAGCTATTGATATGACAAGGCGTAGGGATGAGATTAACTTGTCAAATCTAGCCATAAATAAGATTCAGCAAAGTGCATTTAGTGAGCTGGTTGATCCTTGTCTTGGTTTTGATTCAGATAGTGAGGTAAAGAGGATGATGGTTTCGGTGGCAGAATTAGCTTTTCAGTGTTTGCAACGGGACAAGGAATTGAGACCCTCTATGGACGAGGTTTTGAAGGTGCTGATGAGAATTGAAACTGGGAAGGATATGGGTGAGCATCCAGATGATGTAGAAGATTTACGCCCCCCCTCTCTACCTTCACCAGATTGGGATGAGAATGGATTAGTGAGAAAAATGATGGTTCATCCTTCACCTAAAGCCGTCACTGATACATGGCACAGTGAGTCTACTACGCCTAATGGCAGTGGGTAA 1986 0.2518 MALVDLFCFLLFCHLVLILSAGYGNGHQDCPHSFTCGNLGTFHYPFTKAEKPDCGLLAIHDCDNPHQHRKMIQLEKNGKGIVLTGVAQQNAISILDEDFHKRLQQNPCGTLKNNYSLPSPFSSLYSIHIKFNVTLFKCKQSLKMKPPTHYFNHPCPEYDYDIYYDSLPTPNSKEAHSLFSSCSVIQISSKDLTDTNDILSFVSAEMVLQVVLSNDCDQCYNHRGGQCRLDANKKFYCKEGPKNKSSKSLKLILGLVTGLSVILSAILIIGYIVFRRKYTPSHPQSQSRNTYVDVIGPSSNPDPENGRFYFGVPLFSYKELQKATYNFHHARQLGSGGFGTVYYGKLQDGREVAIKRLYEHNYRRVEQFMNEVQILTRLRHKNLVSLYGCTSSHSRELLLVYEHVPNGTVACHLHGELARRDTLPWHTRMKIAIETASALSYLHASDIIHRDVKTKNILLNESFSVKVADFGLSRLFPNDVTHVSTAPLGTPGYVDPEYHQCYQLTNKSDVYSFGVVLIELLSSMPAIDMTRRRDEINLSNLAINKIQQSAFSELVDPCLGFDSDSEVKRMMVSVAELAFQCLQRDKELRPSMDEVLKVLMRIETGKDMGEHPDDVEDLRPPSLPSPDWDENGLVRKMMVHPSPKAVTDTWHSESTTPNGSG 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01152 661 Gene3D Phosphorylase Kinase; domain 1 304 403 - -
Gma20g01152 661 ProSiteProfiles Protein kinase domain profile. 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01152 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Gma20g01152 661 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 7 660 - -
Gma20g01152 661 MobiDBLite consensus disorder prediction 647 661 - -
Gma20g01152 661 Pfam Protein kinase domain 327 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01152 661 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Gma20g01152 661 SUPERFAMILY Protein kinase-like (PK-like) 309 603 IPR011009 -
Gma20g01152 661 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 660 IPR044652 -
Gma20g01152 661 SMART serkin_6 327 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01152 661 Gene3D Transferase(Phosphotransferase) domain 1 404 611 - -
Gma20g01152 661 MobiDBLite consensus disorder prediction 607 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01152 Gma-Chr20 38355280 38358415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01152 34 661 Receptor kinase-like Gene Family AT1G25390 49.921 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma20g01152 Pkinase 7.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01152 - - gmx:100791822 1335.47