Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01147 ATGGTTGTGGTGCTTCTATTTTCTGAGGTGGAAATGTCTCTGGTGTATGTAATCCTTTTGATTTCTTGTGTAATGGTGGTTCttctctccgctgggaatgctaatgggcaccatgatgattgtccagactcatttgactgtggaactttggggacatttagcttccctttcaccactgtagaacgccacaattgtggtgttcttgcaatccaaggctgtaatgatcctaaccaaacatcagtgaagtatgtccagttgaacaataagggaaaaCCATTCCAAGTTACACATGTAAGTAGTCATGGTCGCCGCCCTAGAAGTATTTCCATTATTGATATGGAGTTCAGCAAGCTTCTGGAAAATGGTAGTTGTGCGGTCTTCAACTATAATATTACTGTCCCTCCTTCCTCTCCTATGGGTTATTTTGATTTGCAAAACAATATAAGCACCTTCAATTGCAGCCGCCATCAACACAAACtcaaccatacaaatgacttcatcaactatacaaatgatttcatcaactatacCAGTACCAGATGTCCTTCCTCTGTTTTTTACTTTGCCCCTCCATCCTATTATGATCAGTCCCTGCGCTCTTTAATCTCCTTATGTTCTATGGTTAAACTTCCTGTCAGACAAGATTCTCAGTTCATCAAAAACCCATTTGGATTTTTAAATGCTGAAATTACCTTTGAATTCCAGTTTTCAAGTGAATGTCACCAGTGTTATAATGAAGAAAGAGGAGACCATTGCCGACTTGACAGCAACGGAACTTTTTATTGCGCCAAGAGGAAAACTAGAGTTTCGACTCGGAAGCTAGCATTGATGTTAGGCACCGGCGTAGGACCTTGGATCATATTCGGGTTGTTCCTCACGTTACGCCACTGCAAACGGAAATATGGTCAATCCAGCATCACTAATGCTGATCCCTACCCTAGTCGTGACACAGAGAATGACAGGATCTTCTTTGGGGTACCCATTTTCTCCTACAAGGAACTTCAAGAAGCATCAAACAATTTTGACCCCACTAGAAAACTAGGAGATGGAGGCTTTGGCACTGTTTACTATGGAACACTAAGAGATGGAAGGGAAGTTGCAATCAAGCATCTATTTGAGCACAATTACAAGAGAGTGGAGCAGTTTATGAATGAAATTGAGATCCTTACTCGCCTACGCCACAGAAATCTTGTGTCCCTCTATGGCTGCACTTCACGTCACGGCCAAGAGCTACTGCTTGTATATGAATACGTTCCTAATGGCACAGTTGCTAGCCATCTCCATGGTGATTTAGCAAGGGTTGGTTTGTTGACATGGCCTATTCGAATGCAAATTGCCATAGACACTGCTGCTGCATTGACCTATCTCCATGCTTCAAACATCATCCACCGTGATGTCAAAACCAACAACATTTTACTTGACATTAGTTTTTCGGCTAAGGTAGCAGATTTTGGGCTTTCAAGATTGCTCCCCAATGATGTAAGCCATGTCTCCACAGCTCCACAAGGGTCTCCGGGGTATCTTGACCCTGAATATTTCCAATTCTACAGGCTCACGGACAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTTATTGAGCTGATATCATCCATGCCAGCAGTTGATGCAGCCAGGGAAAGAGATGAAGTTAACTTGGCAAATCTTGCCATGAAAAAGATTCAAAAAGGAAAGCTTAGTGAGCTTGTAGACCCATCCTTGGGGTTTGAGTCAGACCAAGTAGTTAAAAGGATGCTAACTTCAGTAGCAGGGTTGGCCTTTCGGTGTGTGCAAGGAGACAATGAATTAAGGCCTTCTATGGATGAAGTTCTGGAAGCACTCAAGAAATTTCAAAATGGGAATTATGAGTCTGAGAATCTAGAGAAAGGAGATGATGATGGTGTTATCTCTTCCACTTCATCCAGCGAAGTACATCCACCtgtttacactggaatttggtaa 1959 0.3701 MVVVLLFSEVEMSLVYVILLISCVMVVLLSAGNANGHHDDCPDSFDCGTLGTFSFPFTTVERHNCGVLAIQGCNDPNQTSVKYVQLNNKGKPFQVTHVSSHGRRPRSISIIDMEFSKLLENGSCAVFNYNITVPPSSPMGYFDLQNNISTFNCSRHQHKLNHTNDFINYTNDFINYTSTRCPSSVFYFAPPSYYDQSLRSLISLCSMVKLPVRQDSQFIKNPFGFLNAEITFEFQFSSECHQCYNEERGDHCRLDSNGTFYCAKRKTRVSTRKLALMLGTGVGPWIIFGLFLTLRHCKRKYGQSSITNADPYPSRDTENDRIFFGVPIFSYKELQEASNNFDPTRKLGDGGFGTVYYGTLRDGREVAIKHLFEHNYKRVEQFMNEIEILTRLRHRNLVSLYGCTSRHGQELLLVYEYVPNGTVASHLHGDLARVGLLTWPIRMQIAIDTAAALTYLHASNIIHRDVKTNNILLDISFSAKVADFGLSRLLPNDVSHVSTAPQGSPGYLDPEYFQFYRLTDKSDVYSFGVVLIELISSMPAVDAARERDEVNLANLAMKKIQKGKLSELVDPSLGFESDQVVKRMLTSVAGLAFRCVQGDNELRPSMDEVLEALKKFQNGNYESENLEKGDDDGVISSTSSSEVHPPVYTGIW 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01147 652 Gene3D Transferase(Phosphotransferase) domain 1 418 628 - -
Gma20g01147 652 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 18 638 - -
Gma20g01147 652 MobiDBLite consensus disorder prediction 621 642 - -
Gma20g01147 652 Gene3D Phosphorylase Kinase; domain 1 314 417 - -
Gma20g01147 652 SMART serkin_6 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01147 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Gma20g01147 652 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Gma20g01147 652 CDD STKc_IRAK 347 616 - -
Gma20g01147 652 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 18 638 IPR044652 -
Gma20g01147 652 Pfam Protein tyrosine and serine/threonine kinase 344 612 IPR001245 GO:0004672|GO:0006468
Gma20g01147 652 ProSiteProfiles Protein kinase domain profile. 341 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01147 652 SUPERFAMILY Protein kinase-like (PK-like) 324 614 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01147 Gma-Chr20 38313170 38317144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01147 41 618 Receptor kinase-like Gene Family AT1G25390 45.299 6.97e-155 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma20g01147 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01147 - - gmx:100788638 1329.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02552 10 52861609 52886501 Gma20g01147 20 38313170 38317144 GST