Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01145 ATGGCCTCTGGTGAAGGGAGGCGGCGTCATCATGATCTTGTGCCTCTTGCTGCATTGCTCAAGAGAGAGATGAAGAGTGAGAAGATGGAGAAGCCTACTGTGAGGGTTGGACATGCAGCTCAGTCCAAGAAAGGGGAGGATTACTTTCTAATTAAGACTGATTGTCAACGAGTGCCTGGGAACTCTTCATCATCCTTTTCTGTATTTGCGATCTTTGATGGGCATAATGGAAACGCCGCTGCCATTTTTACCAGGGAGCATTTGTTAAATCATGTGCTGGGTGCTCTTCCTCGAGGGCTTGGACGAGATGAGTGGTTACAAGCTTTACCAAGGGCATTGGTTGCTGGCTTTGTTAAGACTGACAAAGAATTTCAGAGCAGAGGAGAAACTTCGGGAACCACAGCTACATTCGTAATAGTGGATAGGTGGACTGTGACTGTTGCATCTGTTGGAGATTCCCGTTGTATACTAGATACCCAGGGTGGTGCTGTTACCTCCTTAACTGTTGATCACCGACTTGAGGAGAATATTGAAGAGAGGGAACGTGTCACTTCTAGTGGAGGTGAAGTTGGGAGACTTAGCATTGTTGGTGGGGCTGAGATTGGTCCCCTTCGTTGCTGGCCAGGGGGTCTATGCCTTTCTAGGTCAATAGGTGACATGGATGTTGGGGAGTTCATAGTTCCAATACCATATGTCAAACAAGTGAAGCTATCAAAGGCCGGTGGGAGGCTTATAATTGCCTCTGATGGCATATGGGATGCTCTATCCTCAGAAATGGCTGCAAAATCTTGCCGTGGTTTGCCTGCTGAACTTGCTGCTATGCAGGTTGTCAAGGAAGCACTAAGAACGAGAGGGTTAAAGGATGATACAACTTGCATAGTAGTTGACATAATCCCACCTGATAACGAATTGCCACCAACACCTCCCCCCCCCAAACGGAACAAGCTGAGAGATCTTCTTTCCTTCAGGAAGAGCTCCCGTGATTCTGCCAGTAAGCTGTCAAAAAAGCTTTCCGCTATAAATATAGTGGAGGAACTGTTTGAAGAAGGATCAGCAATGCTTGCTGAAAGATTAGGAAATGATGACAACTTGAACTCGGGGCAATCAACATCTGGCATTTTTGTCTGTGCTGTATGTCAAGTTGATCTTGCTCCAAGTGAGGGCATCTCTGTCCACGCAGGTTCTATTTTCTCCACCAGCTCCAAACCCTGGGAAGGTCCTTTTCTATGTTTTGATTGCCGTGATAAGAAGGATGCTATGGAAGGAAAACGCCCAAGTGGAGTTAAGGTGTCATAG 1296 0.4676 MASGEGRRRHHDLVPLAALLKREMKSEKMEKPTVRVGHAAQSKKGEDYFLIKTDCQRVPGNSSSSFSVFAIFDGHNGNAAAIFTREHLLNHVLGALPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTSLTVDHRLEENIEERERVTSSGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDALSSEMAAKSCRGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPTPPPPKRNKLRDLLSFRKSSRDSASKLSKKLSAINIVEELFEEGSAMLAERLGNDDNLNSGQSTSGIFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWEGPFLCFDCRDKKDAMEGKRPSGVKVS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01145 431 Gene3D - 35 301 IPR036457 -
Gma20g01145 431 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 2 430 - -
Gma20g01145 431 SMART PP2C_4 27 295 IPR001932 -
Gma20g01145 431 SUPERFAMILY PP2C-like 40 297 IPR036457 -
Gma20g01145 431 CDD PP2Cc 43 297 IPR001932 -
Gma20g01145 431 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Gma20g01145 431 PANTHER ALPHABET, ISOFORM E-RELATED 2 430 - -
Gma20g01145 431 SMART PP2C_SIG_2 51 297 IPR001932 -
Gma20g01145 431 Pfam Protein phosphatase 2C 61 269 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01145 Gma-Chr20 38273637 38278154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01145 1 430 PP2C-type Phosphatase Gene Family AT1G68410 78.670 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01145 - - gmx:100779571 823.157