Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01138 ATGGAAACCACCCAGCTTGACTACAACACTAAAAGAGCAAACCCCACTTCCCCAACGCGCTTGAAGCTCTTCGGTTTCAGCGTACACCACGAAGACATCATGGAAGAGGACGAGGTGGTGGTGGCGCATGATGACGTGGCGGACTCCACCACCAAGGCTACTTCCACATCCCCTTCCCCGTCTGACTCGCCGGACTCCTCCGTCGCCGCTGCCGGACCTCCTTCCTCCGGCGACCGGAAATACGAGTGCCAATACTGCTGCCGAGAGTTCGCGAATTCACAAGCACTTGGCGGACACCAGAACGCGCATAAGAAGGAGCGTCAGCAGCTGAAGCGCGCGCAGTTACAGGCCTCTCGAAACGCCGCCGTTTCGTTCGTGCGGAACCCGATGATCTCCGCCTTCGCCCCTCCGCCGCACCTGCTGGCTCCGCCGGGCTCCGTCATGGTCTCGGCGGCACCTCCCTCGTGGGTGTACATGCCGCCACGTGCCGCGCCTCCTCCCTTCCACGTGTCAGTGTCGCACGGTTGCGCGTTCCCGTCGGCGCATGGCAACAACAACGGCTTCAGCGGTGGCAGCAGCAGTAATAGTAATAACGTGACCATAACAACGGGTGTGAAATCTGCGGGTGCAGGGATGTTTCCCTATGTTGGCGTTGTAGGAGATTCCTCATTAGCTGCTTTGTCAACGGTGCAGGTTCAGGCCCGGGCCCACCATGCTAGGATTGATGGGCCCTCTTTGAGTAGGTTTTCCAAAGGTGACGGTGGGCCCAAATTTGATGATGCATGGGGTTTGGACTTGCACCTTAGTCTTGCGCCGGCTGCGCCGCCATCTCTCGGCTCGGCTTGA 846 0.5957 METTQLDYNTKRANPTSPTRLKLFGFSVHHEDIMEEDEVVVAHDDVADSTTKATSTSPSPSDSPDSSVAAAGPPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVSFVRNPMISAFAPPPHLLAPPGSVMVSAAPPSWVYMPPRAAPPPFHVSVSHGCAFPSAHGNNNGFSGGSSSNSNNVTITTGVKSAGAGMFPYVGVVGDSSLAALSTVQVQARAHHARIDGPSLSRFSKGDGGPKFDDAWGLDLHLSLAPAAPPSLGSA 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01138 281 MobiDBLite consensus disorder prediction 37 76 - -
Gma20g01138 281 Gene3D Classic Zinc Finger 63 128 - -
Gma20g01138 281 PANTHER ZINC FINGER PROTEIN GIS3 12 275 - -
Gma20g01138 281 SUPERFAMILY beta-beta-alpha zinc fingers 77 108 IPR036236 -
Gma20g01138 281 MobiDBLite consensus disorder prediction 48 70 - -
Gma20g01138 281 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Gma20g01138 281 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
Gma20g01138 281 PANTHER ZINC FINGER PROTEIN 5 12 275 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01138 Gma-Chr20 38144770 38145615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01138 5 274 C2H2 Transcription Factor Family AT1G68360 42.160 3.01e-53 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01138 - - gmx:102663095 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02558 10 52952756 52953872 Gma20g01138 20 38144770 38145615 GST