Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01123 ATGATGATGAAGACAATTTCCTCTACTGGTTTGAGACCAGAACGAAACCCCTTAGATCTTAACAATTTGCCCGATGAGTACTCTAGAGATGGCAAACAAGTCCTCGAAGACCATACCTCTTCATCCGAGAGGGAAACGGAGACGCTGAACCAGGCTCGTCAACTGGTCTTTCGTTGTGATCATAACATTGCTGCACAAGGTGCCCCTCACTTAGGATGCTGCCAAACAATAGGAACGGGGGGTTATCATCCCTCAGGAGACCCAACAGTGCCTCTAAGATTCCCAAGATACTTCTCAGGTTCATCCTCAACTCACATGCCACCATCCCCGCCACCGCCGCCGCCACCGCAACGACCATACCTATACCCTTCACCTACGAGGCCAGTGTCATTTGGGTCATCACACTTCCCTCTCCAGCATGCAGTGAACGATTACTATGTGGGCCACGTGATGAGTGGTGGCAGCCACGGACACTATGTTGGAGGAGAGAGCACAAGGAGTTACACGTGCATTGGTGCACCGGTGGGGCAAGGTGGCGGATTCGCTGGTGGTAAGGAGGGGTCTGCAGTGCAGGAGGAAGGGTTGAGTACTTGGGGAAGGGGCTATTCAGGTGCACAGGATCGTTTGGATCCTCCCTCAGCGATCAATCGGTTTCAAGATGGTTTCTAA 669 0.5232 MMMKTISSTGLRPERNPLDLNNLPDEYSRDGKQVLEDHTSSSERETETLNQARQLVFRCDHNIAAQGAPHLGCCQTIGTGGYHPSGDPTVPLRFPRYFSGSSSTHMPPSPPPPPPPQRPYLYPSPTRPVSFGSSHFPLQHAVNDYYVGHVMSGGSHGHYVGGESTRSYTCIGAPVGQGGGFAGGKEGSAVQEEGLSTWGRGYSGAQDRLDPPSAINRFQDGF 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01123 222 MobiDBLite consensus disorder prediction 1 48 - -
Gma20g01123 222 PANTHER ZINC FINGER PROTEIN JAGGED 12 43 IPR045320 GO:0003700
Gma20g01123 222 PANTHER ZINC FINGER PROTEIN JAGGED 43 188 IPR045320 GO:0003700
Gma20g01123 222 PANTHER ZINC FINGER PROTEIN JAGGED 43 188 IPR031113 GO:0007275
Gma20g01123 222 PANTHER ZINC FINGER PROTEIN JAGGED 12 43 IPR031113 GO:0007275
Gma20g01123 222 MobiDBLite consensus disorder prediction 1 15 - -
Gma20g01123 222 MobiDBLite consensus disorder prediction 25 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01123 Gma-Chr20 37916646 37920490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01123 43 220 C2H2 Transcription Factor Family AT1G68480 32.143 1.32e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01123 - - gmx:102661548 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02572 10 53131225 53132974 Gma20g01123 20 37916646 37920490 GST