Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01118 ATGAAATCGAGTTGCAATGGGTGTCGCATTCTCCGCAAAGGCTGCAATGATAATTGCATAATCAGGCCTTGTCTTGAGTGGATGAACTCTCCTGAGTCCCAAGCCAACGCCACCCTCTTTCTTGCAAAATTCTATGGTCGTACTGGCTTGCTCAACCTCATCACTGCTGCTCCACAGCACCTTGGCCCAGTTGTGTTCAGGTCACTGTTGTATGAGGCATGTGGGAGATTGGTGAATCCCACTTATGGGTCATTAGGTTTGTTTTGGACTGGGGAATGGGCCCAATGCGAAGCTGCAGTTGATGCCGTGTTGACTGGGTCCAAAATCAATGGTGTGGCACCTTCTGATGGCCATACCTCAGGGACACTTGCTAGTGATCATATTCTCTCAACATGTGATATACGCCATATGAAGAATGGGACAAATGTGGATGACATGAGAGGTAGAATTCAGTTCAAGAACGTCAAACAGGTTATCAAACCAAAACCTCGAATGGGTTCGATCGACTCAACTATGTTATGGAAACCCAACTGCCAGAGTCAGAGCATGGAAACTATCGAGGCTTCATTGGTGAGCCAAGATGAGTTGAACCGAGTTCGTAAAATCAAGTTGGACTTGGAACTCACTCTTGGCTTTCGTTGCCAATCGACCAATGGCAAGAAAACACATTATTGA 675 0.4637 MKSSCNGCRILRKGCNDNCIIRPCLEWMNSPESQANATLFLAKFYGRTGLLNLITAAPQHLGPVVFRSLLYEACGRLVNPTYGSLGLFWTGEWAQCEAAVDAVLTGSKINGVAPSDGHTSGTLASDHILSTCDIRHMKNGTNVDDMRGRIQFKNVKQVIKPKPRMGSIDSTMLWKPNCQSQSMETIEASLVSQDELNRVRKIKLDLELTLGFRCQSTNGKKTHY 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01118 224 PANTHER LOB DOMAIN PROTEIN 1 222 - -
Gma20g01118 224 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Gma20g01118 224 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Gma20g01118 224 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01118 Gma-Chr20 37838418 37839892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01118 1 137 AS2 family AT1G68510 62.774 5.02e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma20g01118 LOB 2.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01118 - - gmx:100779034 465.307