Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01103 ATGGCTACTGATGCCCGTGACTCGCGTCGCAAGTATCGCCGATCATCCTCTCCGGAGGACGTGGACAGATCCTCGAAGCGCCACAAGCACCGCCACCACAGCCACCGCCACCGCCACGGGAGCAAAAAACGCGACGAAGAGATTAAATTCGATGATCGAACAATTGGTGCGGTTCCTTCTCCAACTCCGCACGGGCATCTCCCTGACGACGATGATGTGGAGGAGGGAGAGATCCTTGAAGATGAGGCTCTCGACGGCGAGGTTGGGAAAAAGGAGACGGAATCTGATGCTGAACCCGGTGAAATCAAGGTGACGGGAGATCGAGATGTTCGATCTGATAATCAAAATTCGGGACACCTTACTAAAATTTCAGTAACTAGAAATGAGGACATTAGGGATGATAAATTTATTAGTCCTGCAATCAATGCAGAAGATGATGTCTCTCCTAATTGTTCAAGTTCTGAGACTCGGGATGGAAAGCATGCTCAAGCTCGTACAGATGGCGTGGGCAATGGTTTTTTGGATCCTAAATCTTCCAAAGGGGATAAGTGGCACAATGGGGAACTTGGACATTTTAAAGGTAATGAGAAACTAAAAGGAGACTTTGATGATGAAACACTGGAGGCTAATGTGAGGAAAGCACATTACAATAGGAATTCATCCTCTGAAAGTGGAGGGGGAAAATATAGAATGTCAGGAAGTTCTCCTTCTCATGGTAGATATAGAAGTCGATCAAGATCAATTGGTCATACTAGAGACAGGTCTCGCTCTCGTAGTATCATAGATGAATATGCTCATTCCAAGAGAAGGCGCTCTGACTATGACCATGATGAGGAAAGAGTGAGGGTACGTGGAAGGGAGCATGGTCATGGCAGTGTGGTAGATGATAGAAGGGAATACAGTACCAGATATCACAATCGAGAGGCCAGGGATAGAGATAGGAGTAGGGATAGAGATGTGGATAGAGACTTGCACAGAGAAAAGAAACAAGAGGAAACTAGCAGGGGTAAAGAGATTGAGTGGGAACACAAAAGGGGAAAGGAACGTGAAAGGAGCCGTGAGAGGTATAGAAGGGATGCAGAAAAAGATAGGAGCAGGGAAAGGGAGGAGGATGGGGACAGGAGACAAGAAAAGGAAAGAGATAGGAGCTGGGATACAGTGTTTGAGAGGGATAGGAGAAGGGAAAAGGAAAGAGATAGAAGTAGGGACAGAACAATAGGTGGCAAGAGAGATAGAGACCCGGAGAATGAAAGGGATGATAAGAATCGGGAAAGGCGAGATGATAGATATGGGCACAAAGATAGAGACACTGCAAATGGTAAGGATAGGCATCTGCGTCATGAGGATGGTAATGACAACGGAGATAGATATAGAAAACATTCAAGGCATGAAGAAAATGAATACCATTGGGAAAGAAAAAGAAATTCTGATAATCCTGTAAAGGTTTATAATTCAATGGGAAGTACTGCAGAAGTGGATGAAAGCAAACTAACAAGCAGTGAGGTTGAACCAGATGACTTAGAGGAGGATACATTGCAATTACCTGAGCAAGAAGAGGAAGATCTCAACAGGATTAAAGAAGAGAGTAGAAGAAGAAGGGAAGCAATAATGGAGAAATACAAGAAGCAGCATCAGCAAGTAGAAGCAGTGGTTGGAAATGAAGGAAATGACAAGGATGCAGACATTCCTAATGACATCTCTGAAGCATGTGATGGTAAGACTGATGATGCTGATTATGTGGAGCCATCATTTGCTGTTGGGAAATCTCCTGAAAATGTGAATGTTGCTTCTAAGAAGATATCTCCTGCTGGAGGCCTGGGTGAGGGTACTCCAAAGAGTGAAAGGTCAGAGGACAAGTTTTGTGATGATATATTTGGTGAGACGCCAACGGGAGTTCGGAAATCAGGAAAAGGAGATGGTTTGCTGATTGAGAGGGTTGGCCTACATGACAATTGGGACGATGCAGAGGGTTATTATAGCTATCGTATTGGTGAAATACTTGATAGCCGATATGAAGTCACAGCTGCACATGGGAGGGGTGTCTTTTCGACAGTTGTTCGGGCAAAGAATCTAAAGATGGGAAATGGTGAGCCTGAAGAAGTAGCAATAAAAATTATTCGTAGTAATGACACCATGTACAAGGCTGGTATGGATGAATTGGTCATATTGAAGAAATTAGTAGGTGCAGATCCAGATGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAGATACAGGAATCATCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTTACAGCTGTGAGAGCATACGCAAAACAGCTTTTTATTGCTCTGAAGCATCTCCGGAACTGTGGTGTTCTTCATTGTGATATAAAGCCAGATAATATGTTGGTAAATGAGGCTAAGAATGTTTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAGTTACACCATATCTTGTGAGTCGTTTTTATCGTGCCCCGGAAATAATACTTGGCTTGCCATATGATCATCCACTGGATATTTGGTCTGTAGGTTGTTGTTTGTATGAGTTGTATATAGGGAAGGTTCTTTTCCCAGGGTTTACAAACAATGACATGCTACGGCTTCACATGGAACTGAAGGGCCCTTTTCCAAAGAAGATGCTGCGTAAGGGAGCATTTACTGAACAGCATTTTGATCAGGATCTGAATTTTCTTGCTACTGAGGAGGATCCTGTAACAAAAAGGACCATAAAGCGACTGATACTCAACATTAAGCCAAAAGATATTGGGACACTCATTACTGGCTCTCCTGGGGAGGATCCAAAAATGTTAGCCAACTTTAAGGATCTTCTGGAAAAAGTTTTTGTCTTGGATCCAGACAAGAGGCTGACAGTGTCACAAGCTCTGAACCACCCATTCATCACTGGCAAGTGA 2970 0.433 MATDARDSRRKYRRSSSPEDVDRSSKRHKHRHHSHRHRHGSKKRDEEIKFDDRTIGAVPSPTPHGHLPDDDDVEEGEILEDEALDGEVGKKETESDAEPGEIKVTGDRDVRSDNQNSGHLTKISVTRNEDIRDDKFISPAINAEDDVSPNCSSSETRDGKHAQARTDGVGNGFLDPKSSKGDKWHNGELGHFKGNEKLKGDFDDETLEANVRKAHYNRNSSSESGGGKYRMSGSSPSHGRYRSRSRSIGHTRDRSRSRSIIDEYAHSKRRRSDYDHDEERVRVRGREHGHGSVVDDRREYSTRYHNREARDRDRSRDRDVDRDLHREKKQEETSRGKEIEWEHKRGKERERSRERYRRDAEKDRSREREEDGDRRQEKERDRSWDTVFERDRRREKERDRSRDRTIGGKRDRDPENERDDKNRERRDDRYGHKDRDTANGKDRHLRHEDGNDNGDRYRKHSRHEENEYHWERKRNSDNPVKVYNSMGSTAEVDESKLTSSEVEPDDLEEDTLQLPEQEEEDLNRIKEESRRRREAIMEKYKKQHQQVEAVVGNEGNDKDADIPNDISEACDGKTDDADYVEPSFAVGKSPENVNVASKKISPAGGLGEGTPKSERSEDKFCDDIFGETPTGVRKSGKGDGLLIERVGLHDNWDDAEGYYSYRIGEILDSRYEVTAAHGRGVFSTVVRAKNLKMGNGEPEEVAIKIIRSNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFRYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYIGKVLFPGFTNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDQDLNFLATEEDPVTKRTIKRLILNIKPKDIGTLITGSPGEDPKMLANFKDLLEKVFVLDPDKRLTVSQALNHPFITGK 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01103 989 MobiDBLite consensus disorder prediction 142 527 - -
Gma20g01103 989 MobiDBLite consensus disorder prediction 83 115 - -
Gma20g01103 989 MobiDBLite consensus disorder prediction 26 40 - -
Gma20g01103 989 CDD STKc_PRP4 670 986 IPR044092 GO:0004674|GO:0006468|GO:0045292
Gma20g01103 989 SUPERFAMILY Protein kinase-like (PK-like) 658 988 IPR011009 -
Gma20g01103 989 MobiDBLite consensus disorder prediction 1 25 - -
Gma20g01103 989 SMART serkin_6 671 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01103 989 Gene3D Transferase(Phosphotransferase) domain 1 731 987 - -
Gma20g01103 989 Gene3D Phosphorylase Kinase; domain 1 642 730 - -
Gma20g01103 989 MobiDBLite consensus disorder prediction 1 126 - -
Gma20g01103 989 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 337 989 - -
Gma20g01103 989 Pfam Protein kinase domain 673 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01103 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Gma20g01103 989 ProSiteProfiles Protein kinase domain profile. 671 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01103 989 MobiDBLite consensus disorder prediction 598 617 - -
Gma20g01103 989 MobiDBLite consensus disorder prediction 213 242 - -
Gma20g01103 989 MobiDBLite consensus disorder prediction 479 495 - -
Gma20g01103 989 MobiDBLite consensus disorder prediction 178 212 - -
Gma20g01103 989 MobiDBLite consensus disorder prediction 246 478 - -
Gma20g01103 989 PANTHER DUAL SPECIFICITY PROTEIN KINASE 337 989 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01103 Gma-Chr20 37687159 37694311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01103 624 988 MAP Kinase Gene Family AT2G18170 30.446 2.04e-27 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gma20g01103 Pkinase 3e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02587 10 53291742 53298868 Gma20g01103 20 37687159 37694311 GST