Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01087 ATGGGAAAGAAATCTTTGAAGCTGCCCTCTCTTTTCAAAACCAAAGAAGCCCCAAGAAATCATCATCATCCATGGCAATTCATGCCCTCTTGTGGCCACTCAAAGACCCTCTCTTTCCGTGGTGGAGATGATGACATGTTCAAGACAGTTAACTCTATGTTCTTCGACCCTTCAGCAGAGAGCACTATCGAAACTCCCAAGTCATGGTTCACAACCTCATCTGAATCTGCAAGCATCTCAACTGAGTCAGAAGACTACTACTACTGTGATGGGGAGTCTTTGGAGATGTTGGTACGTGGTGTGAGGTCAGAGAGGCTTTTTTTCGAACCTGGTGACACAAGTTCCATCTTGGAAAAGGCCAAGGCTAGTGGATTTCCCTTCAAAGAAAGTGTGGTCCTAGCCATGGAGTCAGAGGACCCTTATGAGGACTTCAAGAGATCAATGGAGGAGATGGTTGAGTCTCATGGAGTGAGGGATTGGGAAGGCTTGGAGGAGCTTTTAACTTGGTACTTAAGGGTCAATGGTAAAAACAATCATGGGTTTATAGTGGGTGCTTTTGTTGATTTACTCTTTAGTTTAGCTGCTTCTAATGGTTCTAACACTTGTTCTGATTCAACTTCATATTCTTCTGCTGTTTCTTCTTTTGCTTCTTCCCCCTTGAGTGGCCAGAATGAGATTGTTGAGCATGGGATTGGGAATGATGGTGCTGTAACATCTTAG 720 0.4417 MGKKSLKLPSLFKTKEAPRNHHHPWQFMPSCGHSKTLSFRGGDDDMFKTVNSMFFDPSAESTIETPKSWFTTSSESASISTESEDYYYCDGESLEMLVRGVRSERLFFEPGDTSSILEKAKASGFPFKESVVLAMESEDPYEDFKRSMEEMVESHGVRDWEGLEELLTWYLRVNGKNNHGFIVGAFVDLLFSLAASNGSNTCSDSTSYSSAVSSFASSPLSGQNEIVEHGIGNDGAVTS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01087 239 PANTHER TRANSCRIPTION REPRESSOR OFP13 6 220 - -
Gma20g01087 239 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 131 194 IPR006458 -
Gma20g01087 239 Pfam Transcriptional repressor, ovate 137 193 IPR006458 -
Gma20g01087 239 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 6 220 IPR038933 GO:0045892
Gma20g01087 239 ProSiteProfiles OVATE domain profile. 133 192 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01087 Gma-Chr20 37538076 37538795 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma20g01087 Ovate 2.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01087 - - gmx:100527123 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01837 03 44389209 44390435 Gma20g01087 20 37538076 37538795 ECH
Gma19g01878 19 48010169 48010915 Gma20g01087 20 37538076 37538795 ECH
Gma10g00714 10 8642533 8643336 Gma20g01087 20 37538076 37538795 ECH
Gma02g01897 02 44026741 44027487 Gma20g01087 20 37538076 37538795 ECH
Gma20g01087 20 37538076 37538795 Gma20g01087 20 37538076 37538795 ECH
Gma10g02603 10 53422723 53423631 Gma20g01087 20 37538076 37538795 GST