Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01080 ATGTCAGCTAAACTCTGCTTTTGCTACTTCTTCGTCTCTTTTCTCTCTTCACTTTTCTATCTTCTATTATTACCGTTCTCTCTCTCTATTCAGTTTCTAGATATTTCTGGAATTGAGTACCAAAAGAGAGCTTTTGGAGATGCAGGGAAATATGAAATGAAGCTGTCTAATAGTTCTCCATCTATCAAATTTGTGGTTGCAAAGAAGGCTGATAGCCTTTACCCCATTGTCAGTGGTGCAAGCATAGTTGCAAAGTCCTATACTGGGTGCTTGATGAGACTGCTGAAAACATGCAGAGGAATTTTTGATCTGGATATCCTGGAGGTAAGACATGTGATTCTATCTCATGCCATATCCCCAAACCAAGTCTTGGCTAGAGGATCACAAAACATCATATCTTTGGATTTCCAACATTGGTCCGATTTAGTTGGGGAACCTGCAAAAGATGCTGCAGAAGTGTTATGGGAGTCTGACAATTTGGATGAAGATGGTGGTGGCAGCAACAATAAGAATCGATTAAGCAATGTGGGTTTCACCACATCCAAGAGAAGTGAAGAAATAGAATCAAGTGGTAAAGGACGCTGTTTGGATCTGAAGCTGGGGAGCGGGATACCAGTTCTCCCCAACAGTCCTGCACACGTCATTTACTGGCTCTTTAGTCTTAAAATCTGGAGGTTTCAAGCAAGTGAAAACAGTGATTGCAATTAA 708 0.411 MSAKLCFCYFFVSFLSSLFYLLLLPFSLSIQFLDISGIEYQKRAFGDAGKYEMKLSNSSPSIKFVVAKKADSLYPIVSGASIVAKSYTGCLMRLLKTCRGIFDLDILEVRHVILSHAISPNQVLARGSQNIISLDFQHWSDLVGEPAKDAAEVLWESDNLDEDGGGSNNKNRLSNVGFTTSKRSEEIESSGKGRCLDLKLGSGIPVLPNSPAHVIYWLFSLKIWRFQASENSDCN 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01080 235 PANTHER RIBONUCLEASE 147 196 - -
Gma20g01080 235 PANTHER RIBONUCLEASE 43 87 - -
Gma20g01080 235 Gene3D - 34 99 IPR036397 GO:0003676
Gma20g01080 235 PANTHER RIBONUCLEASE H2 SUBUNIT A 43 87 IPR001352 GO:0003723|GO:0004523
Gma20g01080 235 SUPERFAMILY Ribonuclease H-like 45 104 IPR012337 -
Gma20g01080 235 Pfam Ribonuclease HII 44 98 IPR024567 GO:0004523
Gma20g01080 235 PANTHER RIBONUCLEASE H2 SUBUNIT A 147 196 IPR001352 GO:0003723|GO:0004523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01080 Gma-Chr20 37440428 37442793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01080 46 195 Core DNA Replication Machinery Family AT2G25100 42.169 5.83e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01080 K10743 - gmx:100779875 143.28