Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01073 ATGGATTTCTTGTATAAGGGTATTGACTTCTACACAACCATCACCCGTGCGCATTTTGAAGAGATTATCATGGACTTATTCAGGAAGTGCATGGAACTCGCAGAGAAGTGTTTGCGGGACCCTACTATGGATAAGCGCACCGTCCATGAGGCTATTCTTGTCGGTGGTTCTACTAGGAATCCCAAGTGCAAGCTGCTATTCTCGGTGGCGAAGGTAATGAGAAAAATGGAGGATCTTTTGTTGTTATCCACTAGTTTCGAGCCTGCAAGAGGAGTCATGAATGTGTTCATTCCCAGAAACACAACCATTCCCACCAAGAAGGAACAGGTGTTCTCAACCTACTCTAACAACCAGCCCGGTATGGTGGCGGAAGGCTTAGAATATTTTAATAGCATGAAGTATGAGTACTTTATTATGCCTAATCTAAACCCTTATGCATGTGTGGTTGATTTACTTGGTCATTCTAAGAAATTGGAGGAAACTTATGAACTCATTCGGACAATGCCAAGGAACCCTGATCTGGCTGTTTGTGGAGCATTATTAAATGCATGTAGGATTCAATTGGCAACTACATGGAAACAAAGCTTCAACTTGATCAAAGCAGAAGAAGCTGACTACGGAACAATTGGGAAGCACATATTAAATTTTGGATTCAAGGAAAACGAGGATGCTAATAAAGTAAAGACACGAGGAGAATCTATGTTTTAG 708 0.4153 MDFLYKGIDFYTTITRAHFEEIIMDLFRKCMELAEKCLRDPTMDKRTVHEAILVGGSTRNPKCKLLFSVAKVMRKMEDLLLLSTSFEPARGVMNVFIPRNTTIPTKKEQVFSTYSNNQPGMVAEGLEYFNSMKYEYFIMPNLNPYACVVDLLGHSKKLEETYELIRTMPRNPDLAVCGALLNACRIQLATTWKQSFNLIKAEEADYGTIGKHILNFGFKENEDANKVKTRGESMF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01073 235 SUPERFAMILY Actin-like ATPase domain 2 64 IPR043129 -
Gma20g01073 235 PANTHER - 78 123 - -
Gma20g01073 235 PANTHER - 2 66 - -
Gma20g01073 235 PANTHER HEAT SHOCK PROTEIN 70KDA 78 123 IPR013126 GO:0005524|GO:0140662
Gma20g01073 235 PANTHER HEAT SHOCK PROTEIN 70KDA 2 66 IPR013126 GO:0005524|GO:0140662
Gma20g01073 235 Pfam Hsp70 protein 75 121 IPR013126 GO:0005524|GO:0140662
Gma20g01073 235 Pfam Hsp70 protein 6 64 IPR013126 GO:0005524|GO:0140662
Gma20g01073 235 Gene3D Actin; Chain A, domain 4 2 29 - -
Gma20g01073 235 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 82 135 IPR029047 -
Gma20g01073 235 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 75 130 IPR029047 -
Gma20g01073 235 Gene3D - 30 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01073 Gma-Chr20 37378264 37381001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01073 1 122 Calmodulin-binding Proteins AT3G12580 52.564 2.29e-43 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01073 K03283 - gmx:100812707 150.984