Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01054 ATGGGTAGTTGTGGAAGAGAAGGATCAGTGAGACAATATGTAAGATCGAAGGTTCCTCGTTTAAGGTGGACTCCTGAGCTGCACCGTTGCTTTGTTCATGCTATTGATAGCCTTGGAGGCCACCATAAGGCTACTCCGAAGCTTGTTCTTCAGTTGATGGATGTTAAAGGGCTCACGATTTCACACGTCAAGAGCCATCTTCAGATGTACAGAAGCATGAGGGGTGACTTGGGCAGACAAGGTAGGACATCCTCCCAACATAGGAACCAATCTTTTGAGGAGCATGATGATGGATGTGTTGATGAAGGGAATGATGTTGGTGTTGAGTACTCTTGTTCGAAACCAATGGGAAGAGAATCTGATTCCTTCTTCGGCCACAGTAATCTCCCTCCAAAAAGAGCAAGAATCGAGACGAGGAGTTCCATCTCAGAGAGCCTGCAGTGCAGCCAAAGATTATGTGATGCAGTTCAAAATCCGTACTGTTTTTATGATTATCTGCAACAGAAGAAGCCCATGGCTGATGAGCACAAGGAGTTCTCAACATGGCAGCAGGCACAACCCCATTCCCTTCTGTTTCCAGAATTTCCCAACCACACTTCATTCAATTCTCCTAACCAACAATCTGATTTCCTTCAGGTTACTAAATTAAATGAAGGAAAGAGCACTTCACAGCCTAGTAATGTACTTGTGAACACTACTACTGAGACAGCTATTGCAGAAGTTGAAGATGAATTGTCATTATCGCTCACATTGCCAAATCCTTCACCTCAGAGTTCAGGCAGTGAGATAAGTGAGGCAATCTCATCATGCCCTGGGTTTGGCAACAACTACAAGGACTGCTCTAGTTCATCCACTCACACTCTCAAAGAAAGAATTAATTTGGACCTATCTTTAGCCCTATGTGGCAATTGA 912 0.4419 MGSCGREGSVRQYVRSKVPRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQGRTSSQHRNQSFEEHDDGCVDEGNDVGVEYSCSKPMGRESDSFFGHSNLPPKRARIETRSSISESLQCSQRLCDAVQNPYCFYDYLQQKKPMADEHKEFSTWQQAQPHSLLFPEFPNHTSFNSPNQQSDFLQVTKLNEGKSTSQPSNVLVNTTTETAIAEVEDELSLSLTLPNPSPQSSGSEISEAISSCPGFGNNYKDCSSSSTHTLKERINLDLSLALCGN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01054 303 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 303 - -
Gma20g01054 303 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Gma20g01054 303 Gene3D - 18 74 - -
Gma20g01054 303 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Gma20g01054 303 MobiDBLite consensus disorder prediction 76 100 - -
Gma20g01054 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Gma20g01054 303 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Gma20g01054 303 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 303 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01054 Gma-Chr20 37185086 37190126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01054 1 74 G2-like Transcription Factor Family AT1G14600 75.949 1.81e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma20g01054 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01054 - - gmx:100787188 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02636 10 53693954 53697457 Gma20g01054 20 37185086 37190126 GST