Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01049 ATGCCAGGCAATTTCATAACAGAAGAGCAGCAAAAGGAGGATGACAGTGTTACCCTTTGGACCTCTGAGGACAGAACTTGGCATGTCAACTTCTATCTGAATCGTTCCAGTAAACAAATAATACTAGGTGCTGGTTGGATGGATGCTGTAAAGAATAATAACTTGAAAATAGGGAATGTATGTATTTTTGAGCAAAGTAAGAAACCAGGAATTTCATTTAGAGTTGTTAATTTTCATGACCGAGAAGAATCAAATCCTTCCAAGTTTCCAGGTAATTTAAAAATTGGGGAGAGATCATGGCCTGTGAGGTTGGCTTGA 318 0.3836 MPGNFITEEQQKEDDSVTLWTSEDRTWHVNFYLNRSSKQIILGAGWMDAVKNNNLKIGNVCIFEQSKKPGISFRVVNFHDREESNPSKFPGNLKIGERSWPVRLA 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01049 105 ProSiteProfiles B3 DNA-binding domain profile. 1 81 IPR003340 GO:0003677
Gma20g01049 105 Pfam B3 DNA binding domain 2 67 IPR003340 GO:0003677
Gma20g01049 105 SUPERFAMILY DNA-binding pseudobarrel domain 2 78 IPR015300 -
Gma20g01049 105 Gene3D - 1 82 IPR015300 -
Gma20g01049 105 CDD B3_DNA 12 78 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01049 Gma-Chr20 37139679 37140124 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma20g01049 B3 6.9e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01049 - - pvu:PHAVU_007G019500g 114.39