Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01038 ATGTTATCGGGGTTGATGAACTTATTGAGGGCCTGCTTTCGGCCGGGTTCGGATGGATTTACACGTGCAGGTTCGGATGCCGGTGGTAGACAGGATGGACTATTGTGGTACAAGGACTCGGGGCAGCACTTGAATGGGGATTTTTCAATGGCTGTAATCCAAGCCAATAACTTGCTGGAAGATCAGAGCCAGATTGAATCAGGCTGTTTGAGCTCCAATGAATCCGGCCCTTATGGTACCTTCATCGGTGTCTATGATGGCCATGGAGGGCCCGAGACATCACGGTTTATCAATGATCACCTATTTCACCATCTCAAGAGATTCACTTCAGAGCAACAATCAATGTCGGTGGATGTAATTCGCAAGGCACTCCAAGCAACAGAAGAGGGGTTTATTTCGGTGGTTGCCAGACAGTTTTCTCTGTCACCACAAATTGCGGCTGTCGGGTCATGCTGTCTTGTTGGTGTTATTTGTAATGGAACCCTTTACATAGCAAACCTTGGGGATTCCCGGGCAGTTTTGGGAAGAGCAGTCAAGGCAACTGGCGAGGTTTTAGCCATGCAATTATCAGCAGAGCACAATGCATCGATAGAGACTGTAAGACAGGAGCTGCATGCTTCACATCCTGATGACCCAAATATTGTGGTTTTAAAGCATAATGTATGGCGTGTGAAGGGCCTTATTCAAGTTTCTAGATCTATTGGTGATGTATATTTGAAAAAGGCCGAGTTCAATCGAGAACCACTATATGCTAAGTTTCGACTTCGTGAACCATACAAGATGCCAATACTAAGCTCAGAACCATCAATATCAGTGCATCATTTGCAGCCACATGATCAATTTATTATATTCGCATCTGATGGACTCTGGGAGCACCTTAGCAATCAAGAAGCAGTTGATATAGTTCAAAACAGTCCCCGCAGTGGAAGCGCTAGGAGGCTGGTAAAAGCTGCGCTTCAAGAAGCTGCAAAGAAGAGAGAAATGAGATATTCAGATTTAAAGAAAATTGATCGCGGAGTTCGTCGTCATTTCCATGATGATACCACGGTGATTGTTGTGTATCTTGACTCAAATCTCGTGAGTAGGGAAAGCACTGTGAAGTTCCCTGGCATTTCTGTTAGAGGGGGTGGTATTAACCTGCCTCATAACACACTGGCACCTTGTACCACACCAACAGAGATTGGTGGTAACTGA 1194 0.4539 MLSGLMNLLRACFRPGSDGFTRAGSDAGGRQDGLLWYKDSGQHLNGDFSMAVIQANNLLEDQSQIESGCLSSNESGPYGTFIGVYDGHGGPETSRFINDHLFHHLKRFTSEQQSMSVDVIRKALQATEEGFISVVARQFSLSPQIAAVGSCCLVGVICNGTLYIANLGDSRAVLGRAVKATGEVLAMQLSAEHNASIETVRQELHASHPDDPNIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPYKMPILSSEPSISVHHLQPHDQFIIFASDGLWEHLSNQEAVDIVQNSPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVIVVYLDSNLVSRESTVKFPGISVRGGGINLPHNTLAPCTTPTEIGGN 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01038 397 Pfam Protein phosphatase 2C 77 324 IPR001932 -
Gma20g01038 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Gma20g01038 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Gma20g01038 397 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 6 387 - -
Gma20g01038 397 SMART PP2C_4 39 353 IPR001932 -
Gma20g01038 397 PANTHER ALPHABET, ISOFORM E-RELATED 6 387 - -
Gma20g01038 397 CDD PP2Cc 48 355 IPR001932 -
Gma20g01038 397 Gene3D - 37 366 IPR036457 -
Gma20g01038 397 SUPERFAMILY PP2C-like 55 356 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01038 Gma-Chr20 37017848 37021246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01038 1 393 PP2C-type Phosphatase Gene Family AT4G38520 76.590 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01038 - K01102 gmx:100794801 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02648 10 53840173 53844967 Gma20g01038 20 37017848 37021246 GST