Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01021 ATGCAATCTATCAGGAAGTCCTTCAAATCTTATGGTTCTTACAACAAACATTCTCGGTTTTCCGGCGCCGGAAACTCTGATTCTGATCACGAGCAGCAGCTCCCCATTCTTCACGACCAAGAAACCCACTGCCACCCTGCCATGCCCGCCGGCGACTACGTCGTCAAAATCAACGAGGACGGAAGCGAGGCCCCCCAGGGCAACAGGATTTGGCGCGAGTCCAGCTACGAATTCTGGAACAACGATGGCGCCACCACCACCGCCGGCGGAAGCGACCAGAGCTTCGATTTCCGCCAGTCGGAGGACCCGCCGTCGCAGCTGATCGGGCACTTCCTTCACAAGCAGCGAGCCTCCGGCGAGATGCAGCTCGACATGGATTTGGAGATGGAGGAGCTGCAGCGCGAAGGCGACGACGGAAAGTTAACGCCGGTGGATGAATCTCCGGTGACTCACCGCGTCTCGAGAGAGCTCAAGGTTTCCTTCGAGGAACCTACCTGCAATGTGAATTTCCTGGAAGCGCAAAACGACGCCGTCAGAAGAAGGCACAGCAAGGACTCGCCGTCGATCGCGGAGTTCCAACGCCCTCCGCAACCGCCCCAACACGACTGTCGCCGGTCTCCCTCGCCGTCGCCAGCCGGCGACGAGGAGGTTGTTCGGTGCACCTCGAACGCTTCCTTCGAGAGAAGCCTTTCCATGCAGAGAAAATCGGCCTTGTTGAAGGCCAAGACGAGGTCTAGGTTAATGGACCCGCCCGAAGAGCCCGACAGAAAATCGAGTCGGGTTCTCAAATCGAGTCAGCTCCTATCCGGGTTTCTAGGGAAGAAGAATGATGAAGAGGATGAGGATCCTTTTTTGGAAGAGGATCTTCCTGATGAGTTTAAGGAGACTCATTTCAGCTTGTGGATTCTTCTCGAGTGGTTGAGTTTGATTTTGATCATTGGGTTGTTGATAACCACCCTTTGTGTTCCCTTTCTTAGGAACAAGGATCTGTGGCAGCTTAGGTTGTGGAAATGGGAGGTTATGGTTTTGGTTTTGATCTGTGGCAGGCTGGTGTCTGATTGGGTTATTAGGATTGCTGTGTTCTGCATTGAGAGGAACTTCCTTTTGAGGAAGAGGGTCTTGTATTTTGTATATGGTGTGAAGAAGGCTGTTCAGAATTGTGTTTGGTTGGGGCTTGTGTTGATTGCTTGGCATTTGTTGTTTGACAAGAGGGTGCAGAGGGAGACCCGCAGCAATTTCCTCGAGTATGTGACTAAGGTGTTGGTGTGTTTCCTTGTGGGGACTTTGGTGTGGTTGTTGAAGACCCTTATGGTTAAGGTGTTGGCTTCCTCTTTTCATGTGAGTACCTACTTTGACAGGATTCAGGAATCGCTGTTTAACCAGTTTGTGATTGAGACGCTTTCGGGGCCGCCTTTGGTGGAGATTCGGAAGGCTGAGGAGGAGGAGGAGAGGCTTGCCGATGAGGTTCAGAAGCTTCAGAATGCTGGGGTTACCATACCCCCTGATCTTAGGGCATCTGCCTTTTCTAATATTAAGAGTGGGAGGTTGAGGAGTGGAATGCTTCCGAAAAGCCCCAGATTTAAGAGTGACAAGTTTTCTCGGCCTCTTTCCAAGAAGTCTGATGAGCCGAATATGATCACTATGGATAACCTGCATAAGCTGAATCCCAATAACATCTCTGCCTGGAATATGAAAAGGTTGATGAACATGGTCCGGAATGGGGCTCTTTCTACCCTGGATGAACAGATTCTTGATAACTCGATGGATGACGAGAATGCCACGCAAATTAGAAGTGAAAACGAGGCGAAGGCTGCAGCTAAGAAAATATTTCAAAATGTTGCTAGACGCGGGTGCAGGTATATATACCCGGATGACTTGATGCGCTTTATGCGAGAAGATGAAGCTGCAAAAACCATGAATCTCTTTGAAGGAGCGTCTGAAGCTGAGAGAATCAGCAAATCGGCCTTGAAGAACTGGGTGGTCAATGCCTTCAGGGAAAGGAGAGCACTTGCTTTGACATTGAATGACACCAAAACGGCAGTGAACAAACTTCATCGAATGCTCAATTTTATAGTTGCAATTGTTATACTGGTTATTTGGCTCTTGATATTGGAACTTGCCACCACCAAATTTCTTCTCTTTGTGAGCTCACAGGTTGTCGTGGTTGCATTTGTATTTGGAAACACCTGCAAGACCATATTTGAAGCAATTATTTTCTTGTTTGTCATGCACCCATTTGATGTGGGAGATAGATGTGAAATTGATGGGGTTCAGATGGTGGTAGAAGAAATGAACATATTGACAACCATATTTCTGAGATATGATAATCAAAAGGTCATCATCCCTAACAATGTCCTTGCTACCAAGGCCATATATAACTATTACCGGAGTCCTGACATGGGAGATGCTATCGAATTCTGTTTACATATATCTACCCCAGTTGAAAAGATTTCACTCATTAAACACAGAATACAAAGTTACATTGATAACAAGAAGGAGCACTGGTATCCTTCACCTTTAATCGTATACAGGGATTATGACCAATTAAACATGGTGAGAATGGCTATCTGGCCAACTCATAGAATGAACTTCCAAGACATGGGAGAAAGGTTTGTGAGGAGATCCCTTTTGCTTGAAGAGATGATCAAGATTTTTAGGGAGCTTGACATTAATTACCGTCTATTGCCCCTGGACATCAACGTGAGAGCGACTCCTACCACCTCTGATCGTCTTCCACCTAGTTGGGCATCAGTTCCAACTCCAAGTTGA 2769 0.4763 MQSIRKSFKSYGSYNKHSRFSGAGNSDSDHEQQLPILHDQETHCHPAMPAGDYVVKINEDGSEAPQGNRIWRESSYEFWNNDGATTTAGGSDQSFDFRQSEDPPSQLIGHFLHKQRASGEMQLDMDLEMEELQREGDDGKLTPVDESPVTHRVSRELKVSFEEPTCNVNFLEAQNDAVRRRHSKDSPSIAEFQRPPQPPQHDCRRSPSPSPAGDEEVVRCTSNASFERSLSMQRKSALLKAKTRSRLMDPPEEPDRKSSRVLKSSQLLSGFLGKKNDEEDEDPFLEEDLPDEFKETHFSLWILLEWLSLILIIGLLITTLCVPFLRNKDLWQLRLWKWEVMVLVLICGRLVSDWVIRIAVFCIERNFLLRKRVLYFVYGVKKAVQNCVWLGLVLIAWHLLFDKRVQRETRSNFLEYVTKVLVCFLVGTLVWLLKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIRKAEEEEERLADEVQKLQNAGVTIPPDLRASAFSNIKSGRLRSGMLPKSPRFKSDKFSRPLSKKSDEPNMITMDNLHKLNPNNISAWNMKRLMNMVRNGALSTLDEQILDNSMDDENATQIRSENEAKAAAKKIFQNVARRGCRYIYPDDLMRFMREDEAAKTMNLFEGASEAERISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFIVAIVILVIWLLILELATTKFLLFVSSQVVVVAFVFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTIFLRYDNQKVIIPNNVLATKAIYNYYRSPDMGDAIEFCLHISTPVEKISLIKHRIQSYIDNKKEHWYPSPLIVYRDYDQLNMVRMAIWPTHRMNFQDMGERFVRRSLLLEEMIKIFRELDINYRLLPLDINVRATPTTSDRLPPSWASVPTPS 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01021 922 MobiDBLite consensus disorder prediction 241 262 - -
Gma20g01021 922 MobiDBLite consensus disorder prediction 81 105 - -
Gma20g01021 922 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2 909 - -
Gma20g01021 922 MobiDBLite consensus disorder prediction 524 544 - -
Gma20g01021 922 MobiDBLite consensus disorder prediction 177 219 - -
Gma20g01021 922 Pfam Mechanosensitive ion channel 687 890 IPR006685 GO:0016020|GO:0055085
Gma20g01021 922 MobiDBLite consensus disorder prediction 245 260 - -
Gma20g01021 922 MobiDBLite consensus disorder prediction 81 101 - -
Gma20g01021 922 MobiDBLite consensus disorder prediction 1 31 - -
Gma20g01021 922 Gene3D - 745 794 IPR023408 -
Gma20g01021 922 MobiDBLite consensus disorder prediction 132 152 - -
Gma20g01021 922 MobiDBLite consensus disorder prediction 1 49 - -
Gma20g01021 922 PIRSF Memb_At2g17000 38 922 IPR016688 -
Gma20g01021 922 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 2 909 IPR016688 -
Gma20g01021 922 Coils Coil 475 495 - -
Gma20g01021 922 SUPERFAMILY Sm-like ribonucleoproteins 735 794 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01021 Gma-Chr20 36880269 36884252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01021 52 922 Mechanosensitive Ion Channel Family AT1G78610 57.253 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01021 K22048 - gmx:100789882 1742.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02662 10 53949203 53953220 Gma20g01021 20 36880269 36884252 GST