Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00984 ATGCAGCAGCCGGAGAAGCAGATTAACGCGCCAGCCGGAATGCCTCTCCCGGAGCGCCGGAGAAGGCGACGGAGCTCTGGTATATGTGCCACTTCCGGTGTTAGGGTTCAGCCACAAGAAGAACAACAACAAGTGGCAACGCGTGGGACTGTTCTTACAGACTCTGACCAGTTCTATTTCAACTGGTATGCTCACATTGACGTTCACGAAGAGATGATCAAGGATCGTGTGCGGACTGATGCTTATAAGAATGCAATAATGCGTCATAAGGATTTTATTAGAGACAAAGTTGTACTTGATGTTGGATGCGGCACTGGCATCCTTGCTATATTTTGTGCTCAGGCTGGTGCAAGACGGGTGTATGCAGTTGAAGCAAGTAACATTGCCCTGCAGCAGACAATCCGTGTTGTTGAAGCTAACAATCTTTTGAACATTATCACGGTATTGCACGGACGAGTTGAGGATGTTGAAATCGGTGAAAAGGTTGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATGTGAGAGTATGCTTGGAAGTGTTATTACTGCCAGAGATCGCTGGCTCAAACCTGGAGGTCTAGTTCTTCCTTCAAAGGCAACGTTGTACATGGCTCCTTTTACACATGCAAAAAGATACCGGGAAAGCATTGACTTCTGGCGAAGTGTTTATGGAATTAATATGTCTGCCAtggtaccattagcaaaacagtgtgcattcgtgggaccttctgtggagacaattactagtgaaaatgttttggcatggccacaagtggtgaaatgtgtgaactgttcttctgttaccattcctgagctagaatctataacaacaaggtttaagttcaattcattggtgaaagCACCACTACATGGTTTTGCATTTTGGTTTGATGTTGAATTTACTAGGCTATCACCAGAGCCAATAAGTTTTCAGTTATCAACTTCACTTGTTGACGATCATCCAGTGGGTAGTCAGAGACAAGATTTGAGAGACCCTACACTGCTCCTGTCCACTGCACCTGAAGCCCTGCCAACACATTGGCAACAGACCTTGATATACTTTTATGAGCCGATAGAACTGGAACAAGATCAACTTATTGAAGGAAAAGTGACATTATCACAAAGCCAAGAAAATCACCGGAATCTGAATATTGAACTTGTATATGCTACAGGAGGTCAATCAtatgtcaaagtgtctgttatgtga 1215 0.372 MQQPEKQINAPAGMPLPERRRRRRSSGICATSGVRVQPQEEQQQVATRGTVLTDSDQFYFNWYAHIDVHEEMIKDRVRTDAYKNAIMRHKDFIRDKVVLDVGCGTGILAIFCAQAGARRVYAVEASNIALQQTIRVVEANNLLNIITVLHGRVEDVEIGEKVDVIISEWMGYMLLCESMLGSVITARDRWLKPGGLVLPSKATLYMAPFTHAKRYRESIDFWRSVYGINMSAMVPLAKQCAFVGPSVETITSENVLAWPQVVKCVNCSSVTIPELESITTRFKFNSLVKAPLHGFAFWFDVEFTRLSPEPISFQLSTSLVDDHPVGSQRQDLRDPTLLLSTAPEALPTHWQQTLIYFYEPIELEQDQLIEGKVTLSQSQENHRNLNIELVYATGGQSYVKVSVM 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00984 404 Gene3D - 201 402 - -
Gma20g00984 404 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 63 394 IPR029063 -
Gma20g00984 404 Gene3D Vaccinia Virus protein VP39 52 199 IPR029063 -
Gma20g00984 404 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 56 404 IPR025799 GO:0016274|GO:0018216
Gma20g00984 404 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 30 402 IPR025799 GO:0016274|GO:0018216
Gma20g00984 404 CDD AdoMet_MTases 98 198 - -
Gma20g00984 404 PANTHER BNAC03G41340D PROTEIN 30 402 - -
Gma20g00984 404 MobiDBLite consensus disorder prediction 1 34 - -
Gma20g00984 404 Pfam Ribosomal protein L11 methyltransferase (PrmA) 95 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00984 Gma-Chr20 36503379 36512091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00984 59 394 C2H2 Transcription Factor Family AT3G12270 34.324 1.14e-59 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00984 K11437 - gmx:100795672 794.267