Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00981 ATGGCATCATCTCAGTCGAGGAAGAGAGTTGACGCCGTCGATTCTCGCGCTGCTTCCGTTCTCGTTCGCGCCAAAGATGGCAGTGCTTTTGCTCGTTGCGACGATTGCAAGAAGAATGTGCCGGTTGCACTCATCGACATGCACAGTTGCAGCCTTGAAGCTAAAATTAAAATGAACCTAGACGCTCAAGTTGTGGAACAGGCTGCTGAAGCTAAGAAGCCGGAGAGGAAGAAGCCCAAATCTAAAGAGCCTATGGCAAAAAAAGCTAAAGTTGGGAAGGGGAAGAAAGTCAAGGATCCTAACATGCCTAAGCGTCCTCCCACAGCTTTCTTTGTCTTCTTGGATGATTTTAGAAAATCTTTCAAAGAAGCTAATCCTGATTCTAAGGATGTTAAAAGGGTTGGTAAAGAGGCTGGTGAAAAGTGGAGGTCTATGACTGATGAAGAGAAGAAGCCATATCTTGACAAAGTTGCTGAGCTTAAGGAAGAGTACGAGAAGGCTATGGAAAGCTATGAAGCTGGTCAAGATGAAGAAGATCAAACTGTGTCTGATAAGGAAACTTCTGATAAGGAAGCTGCTGCAAAAGAAGTTGCAATAGAAGTTGAAGAGGAGCTAACTGACGAGGACTAA 630 0.446 MASSQSRKRVDAVDSRAASVLVRAKDGSAFARCDDCKKNVPVALIDMHSCSLEAKIKMNLDAQVVEQAAEAKKPERKKPKSKEPMAKKAKVGKGKKVKDPNMPKRPPTAFFVFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVAELKEEYEKAMESYEAGQDEEDQTVSDKETSDKEAAAKEVAIEVEEELTDED 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00981 209 Gene3D High mobility group box domain 98 174 IPR036910 -
Gma20g00981 209 MobiDBLite consensus disorder prediction 123 146 - -
Gma20g00981 209 SUPERFAMILY HMG-box 94 177 IPR036910 -
Gma20g00981 209 MobiDBLite consensus disorder prediction 165 209 - -
Gma20g00981 209 MobiDBLite consensus disorder prediction 68 102 - -
Gma20g00981 209 CDD HMGB-UBF_HMG-box 103 169 - -
Gma20g00981 209 MobiDBLite consensus disorder prediction 67 105 - -
Gma20g00981 209 Pfam HMG (high mobility group) box 103 172 IPR009071 -
Gma20g00981 209 SMART hmgende2 102 173 IPR009071 -
Gma20g00981 209 MobiDBLite consensus disorder prediction 165 200 - -
Gma20g00981 209 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 4 195 - -
Gma20g00981 209 Coils Coil 154 177 - -
Gma20g00981 209 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 4 195 - -
Gma20g00981 209 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 103 172 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00981 Gma-Chr20 36464083 36465917 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Gma20g00981 HMG_box 2.3e-21 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00981 K25507 - gmx:100306558 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02699 10 54227561 54228899 Gma20g00981 20 36464083 36465917 GST