Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00958 ATGGCAATCGATAGAATTGCAATTGTGTCGCCTAGAGAGGCTAGCAATCCTGCTGCAATCAGAGCAGCATTTGCAGAGCTCTTCTCTATGCTCATTTTTGTCTTTGCAGGACAAGGCTCTGGCATGGCCTATAGCAAACTTATAGGCAATGGACCTGCAACTCCTGGTGGTCTTTTAGTTGCATCATTGTCTCATGCATATGGGCTTTTTGTGGCGGTTGCTGTGGGAGCGAACATTTATGGGGGTCATATCAACCCTGCAGTCACATTTGGTGCTTTCATAGGAGGAAACATAACCCTCTTGAGAAGTATTTTCTATTGGATTGCACATTTGGTGGGTTCAGTTGTTGCTTGCATTCTTCTCAATTTTTCTAGTGGTGGAATGGTAAACCATCCATTCTTAAGCTTTAAACACTCATATCATATCAATATGTAA 435 0.4253 MAIDRIAIVSPREASNPAAIRAAFAELFSMLIFVFAGQGSGMAYSKLIGNGPATPGGLLVASLSHAYGLFVAVAVGANIYGGHINPAVTFGAFIGGNITLLRSIFYWIAHLVGSVVACILLNFSSGGMVNHPFLSFKHSYHINM 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00958 144 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Gma20g00958 144 ProSiteProfiles CRIB domain profile. 129 143 IPR000095 -
Gma20g00958 144 PANTHER AQUAPORIN TIP1-1 1 133 - -
Gma20g00958 144 Pfam Major intrinsic protein 15 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma20g00958 144 Gene3D Glycerol uptake facilitator protein. 4 141 IPR023271 -
Gma20g00958 144 PANTHER AQUAPORIN-8 1 133 IPR034294 -
Gma20g00958 144 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma20g00958 144 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma20g00958 144 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma20g00958 144 SUPERFAMILY Aquaporin-like 16 141 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00958 Gma-Chr20 36254406 36255624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00958 1 133 Major Intrinsic Protein MIP AT4G01470 74.436 2.64e-65 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00958 K09873 - gmx:100818197 221.476