Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00954 ATGGTTGTGCTGAGCGAGGGTCTTACACAAATTCTAATACCTGTGACTGCGTTTATTGGAATTGGGTTTGCTTTGCTTCAATGGCTTTTGGTGTCAAGGGTCAGAGTCTCTTCTGCTGATCACACGGAAGCAGACAACGGATATAGAAAAAGCTTAATGGGAGATTCAGAGTTGGAGAATGGTGTTCAGAGTGTTGAAGTTACCAATAAGTGTACTGAAATCCAGCATGCCATTTCTGTTGGAGCTACTTCATTTTTGTTTACCGAGTATAAGTACCTGACTATCTTCATGGGAGTGTTTGGTGCAATAATTTTCGTCTTTCTGGGATCTGTGAAGGGCTTTAGTACACAAAGTGAACCTTGCACTTACAATGAAGGCAATATTTGTAAACCAGCACTTGCTAATGCCATCTTTAGCACCGTTGCATTCTTGCTTGGTGCTCTAACCTCTGTCCTTTCTGGCTTTCTTGGAATGAAGATTGCGACCTATGCCAATGCTAGAACTACTCTTGAAGCAAGGAAAGGAATAGGAAAGGCTTTTGTTATTGCTTTCCGGTCTGGTGCAGTGATGGGCTTTCTTCTTTCTGCAAATGGCCTGTTGGTGCTATACATCACCATCAATTTATTTAAACTGTATTATGGAGATGACTGGGAGGGACTTTACGAGTCTATCACCGGCTATGGCCTTGGAGGTTCATCAATGGCACTCTTTGGAAGAGTTGGAGGTGGCATATACACCAAAGCAGCTGATGTTGGTGCTGACCTGGTGGGGAAAGTTGAACACAATATCCCTGAAGATGATCCGCGCAACCCAGCTGTTATTGCAGACAACGTAGGAGACAATGTTGGAGATATCGCTGGGATGGGTTCAGACTTATTTGGGTCTTATGCAGAATCATCATGTGCAGCTTTATTTGTAGCATCCATATCATCGTTTGGAACAAATCATGATCACACAGCCATGTCATATCCTCTCATCATAAGCTCCATGGGAATTGTGGTTTGCTTGATTACGACTCTTTTTGCAACTGATCTGTTTGAAATTAAAAACGTGAGCCAAATAGAACCATCCTTGAAAAGACAGCTTCTTATCTCAACTATATTAATGACTGCTGGTATTGCCATAGTCAGCTTCACTGCCTTACCATCAGAATTTACCCTCTATAACTTTGGAGCCAAAAAGGTTGTCAAAAACTGGCACCTTTTCTTCTGTGTTGCTATTGGCTTATGGGCTGGACTTGCAATTGGGTACATTACAGAGTACTACACTAGCAATGCTTACAGCCCAGTTCAAGATGTGGCAGATTCCTGCAGAACTGGAGCTTCAACAAATGTGATTTTTGGATTGGCACTGGGATATAAATCAGTCATTATTCCCGTATTTGCTATTGCTATTGCTATTTATGTAAGCTTCAGCCTGGCCGCTATGTATGGAATTGCTGTTGCTGCACTTGGAATGCTCAGTACCATGGCCACTAGTCTTGCCATCGATGCTTATGGTCCAATCAGTGATAATGCTGGGGGTATTGCTGAAATGGCTGGAATGAGACATGAGATACGCGAAAGAACTGATGCTCTCGATGCTGCTGGAAACACCACAGCCGCTATAGGGAAGGGTTTTGCTATTGGATCAGCTGCACTTGTGTCTCTTGCATTGTTTGGTGCTTATGTGAGCAGAGCAGGCATCAAAACAGTGAATGTGATGACCCCAAAAGTTTTTATAGGTTTGATTGTGGGAGCAATGCTTCCCTACTGGTTTTCAGCCATGACAATGAAGAGTGTCGGGAGTGCAGCTCTCAAAATGGTTGAAGAAGTTCGTAGGCAATTCAATACCATTCCCGGTCTTTTAGAAGGAAGAGCAAAACCCGATTATGCAAATTGTGTAAAAATTTCCACTGACGCCTCACTTAAGGAGATGATCCCTCCTGGTGCATTGGTTTTGCTTACGCCACTTATTGCCGGAACATTCTTTGGGGTAGAGACTCTTGCTGGGGTTCTTGCTGGTTCACTCATTTCCGGTGTGCAGGTGGCAATTTCAGCTTCAAACACTGGTGGTGCATGGGATAACGCCAAGAAATACATAGAGGCTGGTACTACCCCACATGCTGTATCACTTGGTCCAAAAGGCTCTGATGCTCACAAAGCAGCTGTCATAGGTGACACTGTTGGAGACCCTCTTAAAGATACTTCGGGTCCCTCACTTAACATTTTGATCAAGCTCATGGCAGTTGAATCATTGGTATTTGCTCCATTCTTTGCAGCTCATGGAGGCTTAATCTTTAAATTACTCTGA 2292 0.435 MVVLSEGLTQILIPVTAFIGIGFALLQWLLVSRVRVSSADHTEADNGYRKSLMGDSELENGVQSVEVTNKCTEIQHAISVGATSFLFTEYKYLTIFMGVFGAIIFVFLGSVKGFSTQSEPCTYNEGNICKPALANAIFSTVAFLLGALTSVLSGFLGMKIATYANARTTLEARKGIGKAFVIAFRSGAVMGFLLSANGLLVLYITINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVEHNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALFVASISSFGTNHDHTAMSYPLIISSMGIVVCLITTLFATDLFEIKNVSQIEPSLKRQLLISTILMTAGIAIVSFTALPSEFTLYNFGAKKVVKNWHLFFCVAIGLWAGLAIGYITEYYTSNAYSPVQDVADSCRTGASTNVIFGLALGYKSVIIPVFAIAIAIYVSFSLAAMYGIAVAALGMLSTMATSLAIDAYGPISDNAGGIAEMAGMRHEIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAYVSRAGIKTVNVMTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLLEGRAKPDYANCVKISTDASLKEMIPPGALVLLTPLIAGTFFGVETLAGVLAGSLISGVQVAISASNTGGAWDNAKKYIEAGTTPHAVSLGPKGSDAHKAAVIGDTVGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFKLL 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00954 763 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 3 762 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma20g00954 763 Pfam Inorganic H+ pyrophosphatase 66 748 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma20g00954 763 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 3 762 - -
Gma20g00954 763 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 9 758 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma20g00954 763 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 753 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma20g00954 763 PIRSF H+-PPtase 13 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00954 Gma-Chr20 36211746 36215962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00954 3 626 Primary Pumps ATPases AT1G15690 79.081 0.0 1015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00954 K23025 - gmx:100812548 1478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g00954 20 36211746 36215962 Gma20g00954 20 36211746 36215962 ECH