Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00951 ATGGGAGAAAACAACAACAAGTTTCACTGTTGTGGTGATGATGATGGCTTCGACGAGCCACTGTATTTGAAGTACCCCGCGCTGCAAGATCTGGAGTGGGAAGGCACCCTCATTTGCCTTCCTCCCGATTTATCGTCTCTGTCAAATAACTTCACCCCTAAGGTTCTTCCACTATCGATGTCTCCCCCATCGGAGACCACCGTCACTCGGGTTCCTCCTATGTTGCCGCCGGTGGAGGATGCCACCTACGTTCAACCCAACCTCCAAGATCAATTGTCAGCGTTACAGAACATCAATGCGAACCAGGTTGCTCCCATGTGGCCAGGCTCCCAAATCAATCACTCGCTGTCACGGAAGGGCAGTTCTTCGAAGTCCAATGAGTGCAGGAGATGGAGTGAAGAAGAACACAGGTTGTTTCTGCATGGGCTTCAAAAATATGGAAAGGGAGATTGGATAAACATTTCAAGAATCATCAAAACAAGAAACCCAACTCAAGTTGCTAGTCATGCTCAAAAGTATTTCCTTCGTCAGGCCTCAAGTAATAAAGGCAAAAGAAGAAACATTCATGATATGGTCCTACCAGATGGTCCTGTCCCTCACCGCATTTACCAGCAGAATGGAGTTTCTTTTCGAAATCTTGATGGCCCTATCACTCACCACATTAATCATCAGAATGGGGTTCCTTTTCAAAATCTTATAATGCAGGAGTTATATGAAATCCATCTGGCAGTCCCTCACTACATTAATCAGCAAAATTGGGTTCTTAGACCAATGCGATAA 780 0.4564 MGENNNKFHCCGDDDGFDEPLYLKYPALQDLEWEGTLICLPPDLSSLSNNFTPKVLPLSMSPPSETTVTRVPPMLPPVEDATYVQPNLQDQLSALQNINANQVAPMWPGSQINHSLSRKGSSSKSNECRRWSEEEHRLFLHGLQKYGKGDWINISRIIKTRNPTQVASHAQKYFLRQASSNKGKRRNIHDMVLPDGPVPHRIYQQNGVSFRNLDGPITHHINHQNGVPFQNLIMQELYEIHLAVPHYINQQNWVLRPMR 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00951 259 CDD SANT 130 174 IPR001005 -
Gma20g00951 259 Gene3D - 129 179 - -
Gma20g00951 259 Pfam Myb-like DNA-binding domain 130 174 IPR001005 -
Gma20g00951 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 178 IPR017930 -
Gma20g00951 259 SUPERFAMILY Homeodomain-like 126 178 IPR009057 -
Gma20g00951 259 SMART sant 127 176 IPR001005 -
Gma20g00951 259 ProSiteProfiles SANT domain profile. 126 178 IPR017884 -
Gma20g00951 259 ProSiteProfiles Myb-like domain profile. 130 174 IPR001005 -
Gma20g00951 259 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 236 IPR043363 -
Gma20g00951 259 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 129 177 IPR006447 GO:0003677
Gma20g00951 259 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00951 Gma-Chr20 36189060 36189926 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma20g00951 Myb_DNA-binding 1.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00951 - - gmx:121173128 357.836