Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00936 ATGTCCGAAGAAATGTACGGCGTGCTCCTTTATTACAAGTACGCTGAAATTCCCAACCTCGACGACCTCCTCACTTTCTACCACTCCAACTGCTCCTCCCTCAGCCTCCTCGGTCGTGTTCGGCTTTCTTCCCGCGGCGTCAATGTCACCGTTGGCGGCAACTTATCCTCTCTCGAGATCCACATCGAAGCCCTCAAAGCCTACAACTCTCTGTTTCACGACACTGATTTCAAGCTCGCCAATTGTCATCAGCCATTAAACGACAAAGTAGCCCAGGAATGTGGATTCACTTCTCTATCTATTCGGATCGTCGATGAACTTGTCACTCTCAGTTCTCATCCGCTGTTAAAGTCACCGGATATCTCAAATGCCGGAAAGCATCTCTCTGCACTTGACTTCCATTCTTCCCTCCACAATACCAACAGGGAGAGTCCAGAAAATGACCTTGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGAATTGGCAAATTTCATGTGCCTAATATTGAAACTTTGGATCCACAAGTTAGGCAGTATAGTGATTTGTCCTCTTGGATAGATGATAACGGTGAGCGGTTGAAAGGAAAAAATATCCTCATGTATTGTACTGGTGGAATCAGATGTGAAATGGCATCGGCATATATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGCATACAGCGGTATTTGGAGCAATTCCCAGATGGTGGGTTTTTCAAAGGAAAGAATTTTGTTTTTGATCACCGGATATCAGTTGGAAGTTCAGATGCTAATGTTATTGGGACCTGCCTTATTTGTCAATGTTCATTTGATGATTACTCGTCTCGCTGCCGGTGTGCTTACTGCCGAATGCTTGTTTTGGTTTGTGGTAGTTGCCAGAATGAATCTACACAGTACGTTTGTGAGCTTTGTCAGAAACAGGGCAAGGTCGTTAGGTCAACACAATTAATTGAAAATGGTGAATCAAAATCATCATTGCCAGGTGCCGAATTCCAGAATTTTTCTTCAGATACTATGTGTTTGCCTCAAGTGCCTAGGGGAGATGATCCAAGGACCTCAAGAAAACTGAGAATCTTGTGCTTGCATGGGTTCCGACAGAATGCATCCAGTTTCAAAGGCAGAACAGCATCACTAGCCAAGAAACTCAAGAAAATGGCTGAATTTGTTTTTATCAATGCTCCTCATGAATTGCCATTCATTTACCAAATCCCCGTGTCCGAGCTCAATGTGAATTGTGCATCATCATTGCCACCTAGTCCTCCTCCACCTTTGGAGAATTGCAAGAAGAAGTTTGCATGGTTTTTGGCACCCAACTTTGATGGAAGTAGTGGTGTTGATTGGAAGGTAGCAGACGGTCCATTCGATGCACTTCAATACCAGCAGCAAACTGATGGATATGATATTTCTGTATCACACTTGAAGAATGTGTTTTCCCAACAAGGACCATTCGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGGCTGCCTTAATCTCTGCACAACAAGAAAAGCTGAAAGGTGAAATGGACTTTAAATTTGTAGTCCTGTGCTCTGGCTTTGCTCTCCGGATGAAAGAGATGGAGTGTGGCCCTATCAAGTGCCCGTCTCTTCATATTTTTGGTAATGAGCATGGTAAAGACAGACAAATAGCTAACCAAGCTAGCAAGGAACTTGTTTCTCTATATGATAGTGATTGTTCTGGGATCGTTGAGCATGATTGTGGTCATATAATTCCTACCCGGTCCCCTTACATTGATGGGATCAAGGATTTCCTTGGGCGTTTTCTGTAA 1815 0.4347 MSEEMYGVLLYYKYAEIPNLDDLLTFYHSNCSSLSLLGRVRLSSRGVNVTVGGNLSSLEIHIEALKAYNSLFHDTDFKLANCHQPLNDKVAQECGFTSLSIRIVDELVTLSSHPLLKSPDISNAGKHLSALDFHSSLHNTNRESPENDLVLLDARNLYETRIGKFHVPNIETLDPQVRQYSDLSSWIDDNGERLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANVIGTCLICQCSFDDYSSRCRCAYCRMLVLVCGSCQNESTQYVCELCQKQGKVVRSTQLIENGESKSSLPGAEFQNFSSDTMCLPQVPRGDDPRTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKMAEFVFINAPHELPFIYQIPVSELNVNCASSLPPSPPPPLENCKKKFAWFLAPNFDGSSGVDWKVADGPFDALQYQQQTDGYDISVSHLKNVFSQQGPFDGILGFSQGAAMAALISAQQEKLKGEMDFKFVVLCSGFALRMKEMECGPIKCPSLHIFGNEHGKDRQIANQASKELVSLYDSDCSGIVEHDCGHIIPTRSPYIDGIKDFLGRFL 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00936 604 Pfam Rhodanase C-terminal 247 312 IPR022111 -
Gma20g00936 604 Gene3D - 1 108 - -
Gma20g00936 604 ProSiteProfiles Rhodanese domain profile. 145 245 IPR001763 -
Gma20g00936 604 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 603 - -
Gma20g00936 604 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 603 IPR020936 -
Gma20g00936 604 Gene3D - 117 274 IPR036873 -
Gma20g00936 604 Gene3D alpha/beta hydrolase 359 604 IPR029058 -
Gma20g00936 604 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 121 259 IPR036873 -
Gma20g00936 604 SMART rhod_4 135 242 IPR001763 -
Gma20g00936 604 Pfam Serine hydrolase (FSH1) 361 594 IPR005645 -
Gma20g00936 604 Pfam UPF0176 acylphosphatase like domain 7 106 IPR040503 -
Gma20g00936 604 SUPERFAMILY alpha/beta-Hydrolases 364 604 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00936 Gma-Chr20 35936167 35939768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00936 3 604 Sulfurtransferasese or Rhodanese AT1G09280 63.531 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00936 - - gmx:100786152 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g00936 20 35936167 35939768 Gma20g00936 20 35936167 35939768 ECH
Gma10g01442 10 41484202 41488060 Gma20g00936 20 35936167 35939768 GST