Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00872 ATGTTGTGGCCATTCAAAGTTGTTGTCGATATTAATGACAAACCAATGATTGTTGTCAAGTACAAAGGGCAGGAGAAGCACCTTTATGCTGAGGAAGGAAAAGCTATTGTTGATGCTATTGCATATGGTCTTGACAAGAGGACTAATTGCATTGAAGAGCAAAACATTTTCATCTTTGACCTTGGTGGTGGGATGAGAATTGAAGAGAGGCCTATGGATCAGGTTACCAAATTCGTTAGCGAGGATGATATTGAGGATGACTTCATGGCATATGACATACATAGTGGAGACAAGAAAAAGCCAGCAAAGTCAACAGAAGACCATGTAAAACCAAAGAAGAAAGAGGGTCCTAAAGTTGTGAACTTTTAA 369 0.393 MLWPFKVVVDINDKPMIVVKYKGQEKHLYAEEGKAIVDAIAYGLDKRTNCIEEQNIFIFDLGGGMRIEERPMDQVTKFVSEDDIEDDFMAYDIHSGDKKKPAKSTEDHVKPKKKEGPKVVNF 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00872 122 PANTHER HEAT SHOCK 70 KDA PROTEIN 38 64 - -
Gma20g00872 122 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 36 - -
Gma20g00872 122 PANTHER HEAT SHOCK PROTEIN 70KDA 38 64 IPR013126 GO:0005524|GO:0140662
Gma20g00872 122 PANTHER HEAT SHOCK PROTEIN 70KDA 1 36 IPR013126 GO:0005524|GO:0140662
Gma20g00872 122 Gene3D - 1 35 - -
Gma20g00872 122 MobiDBLite consensus disorder prediction 93 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00872 Gma-Chr20 34883954 34885220 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00872 2 64 Calmodulin-binding Proteins AT5G02490 29.661 2.19e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00872 - K03283 gmx:121174300 103.219