Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00866 ATGCTCCCATCTCTGACAAACAAAAAACCTAAGGGAACCACCATCACACTGGCCAAGGCCAAGAAGGCTGAGGCCCAGGCCGTGGCGGTCGAGCCCCAAAGTTTTCCCAACCTCAAGGAGGCTTTGAACTCCAAGCCCAAGAAGAAGAAGGGAACCACCATCACGCTTTCCGAGTTCAATCATGGTGGTTTCAGCCAGGGCCTTATGTGTGACGAGATGCTCGCCCTTCCCACCGGTCCCAAGGAGCATTCCACCGAAGAAATGCAGTTCAACCCCTTGGCGGTGGTTTCTCCTCCTATGACCGCTCTGGTGGTCGCTCACGCGACTGCAGCAATAACGAAGGTTCGTGGGGGCAAAGGAGGCAGAAGATCGTACGGAGGATTCAACGAGGAGCGCAAGGGTCCGAATCCTAGAGTTTCGGTCCTGGTTTTTGCAATTTCGGAGTGGAGCCTGATCGATGGACGAGAGGCGGTCCACCGCGTGAGCTACGAGAGTATCAGATTTGACCCAAGCATGACTGGGCCTCTATCTCGTTATTCTCCTCCATTTCTTCAAACATCACCACTTCCAGATATATATGAAGTCACGTCGAGTTGCTAA 600 0.5333 MLPSLTNKKPKGTTITLAKAKKAEAQAVAVEPQSFPNLKEALNSKPKKKKGTTITLSEFNHGGFSQGLMCDEMLALPTGPKEHSTEEMQFNPLAVVSPPMTALVVAHATAAITKVRGGKGGRRSYGGFNEERKGPNPRVSVLVFAISEWSLIDGREAVHRVSYESIRFDPSMTGPLSRYSPPFLQTSPLPDIYEVTSSC 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00866 199 Pfam Plant specific eukaryotic initiation factor 4B 21 141 IPR010433 GO:0003743
Gma20g00866 199 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 19 140 - -
Gma20g00866 199 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 19 140 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00866 Gma-Chr20 34725033 34726264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00866 33 89 Eukaryotic Initiation Factors Gene Family AT1G13020 50.820 4.97e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00866 - - gmx:100803366 142.895