Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00864 ATGTGTTCATATTATGTTAGGTCATGGATACAAGAGCTACCACTCTTTGTTAATTTCTTCTTAAGACCAATCTGTGAAAGGGTAAGAAAATACCGTCCCAGTTCGACTCAGTCTAAAGCAGGGAAAACCTCCGAACTCACCCAGATCTTCTCTTTGGGGTTGGGTGTAGGGGTAGACCCAGCAACCAATTCACCTTCTTCCACCCTAAACAAACGCCAAATGGACCTTTCCATCAACGAAAGAAGCCTTGTTAGAGAAAGACAAGAGGAAGACGAAGAAGATGAAAGAGACAACGGTGATGAACCCAAAGAGGGTGCAGTTGAGGTTGGAACACGCAGGCCAAGAGGGAGACCCCCTGGTTCCAAAAACAAGCCCAAACCCCCAATCTTTGTCACCAGGGACAGCCCAAACTCCCTCAGAAGCCATGTCATGGAGGTTGCTGGCGGTGCCGACGTTGCGGAAAGCGTGGCCCAGTTCGCACGGAGGCGCCAGCGTGGTGTGTGTGTCCTCAGTGGGAGCGGTGCCGTGGCCAACGTTACTCTTCGCCAACCTTCAGCGCCAGGAGCGGTCGTGGCACTTCATGGAAGGTTTGAGATTCTGTCCCTAACTGGGACGTTTCTACCTGGTCCTGCCCCACCAGGAGCTACAGGGCTCACTGTGTATCTTGGTGGAGGACAGGGTCAGGTAGTGGGAGGGAGCGTTGTGGGCTCCCTTGTGGCAGCTGGACCAGTGATGGTGATTGCTGCCACTTTTGCTAATGCTACCTATGAGAGGTTGCCGCTTGAGGAGGAGGAAGATGACGGTGGTGCTAGCGCACATGGAGGGAGTACCCTGGGAGGGTCTCCTCCTGGAATGGGTAACAGTGGTGGTAATGGTGATAATAGTGGTGGCGGTCACTTGTCAAGTGGTGGGATTCCTGATCCTTCTTCTTTGGCTTTGTATAATCTCCCACCAAATCTTATCCCTAATGGAGGCCACCATGAGGCTTTTGCTTGGGCTCATGGCCATGGAAGACCACCTTACTGA 1026 0.5253 MCSYYVRSWIQELPLFVNFFLRPICERVRKYRPSSTQSKAGKTSELTQIFSLGLGVGVDPATNSPSSTLNKRQMDLSINERSLVRERQEEDEEDERDNGDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNSLRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGAVANVTLRQPSAPGAVVALHGRFEILSLTGTFLPGPAPPGATGLTVYLGGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLEEEEDDGGASAHGGSTLGGSPPGMGNSGGNGDNSGGGHLSSGGIPDPSSLALYNLPPNLIPNGGHHEAFAWAHGHGRPPY 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00864 341 MobiDBLite consensus disorder prediction 281 298 - -
Gma20g00864 341 Gene3D - 139 266 - -
Gma20g00864 341 MobiDBLite consensus disorder prediction 55 137 - -
Gma20g00864 341 MobiDBLite consensus disorder prediction 60 77 - -
Gma20g00864 341 CDD DUF296 140 215 IPR005175 -
Gma20g00864 341 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 62 341 - -
Gma20g00864 341 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 62 341 IPR014476 GO:0003680
Gma20g00864 341 Pfam Plants and Prokaryotes Conserved (PCC) domain 140 252 IPR005175 -
Gma20g00864 341 ProSiteProfiles PPC domain profile profile. 136 273 IPR005175 -
Gma20g00864 341 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 264 - -
Gma20g00864 341 MobiDBLite consensus disorder prediction 262 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00864 Gma-Chr20 34674613 34676395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00864 102 341 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 66.260 6.05e-93 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00864 - - gmx:100804543 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00085 10 828112 829152 Gma20g00864 20 34674613 34676395 GST