Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00852 ATGACAGTGAAAAAGGGTGTGTTGTCGCCGCAGCGCTATCCACCAAGCGCCACCTGTCCTCCGCCCGCGTCCACGTGCTCCGCGCCACCACGTACGCCCTCGCGGCACCACCCTCTGAGGAAACAATTTTCGTCGTTCTCGCGGTTGGGTATGGCGGCTCCCACCACCACTCGCGCGCGTGCATCGATTCTCTCATGGACCGCCTCCACACCTCAAAAAATCGCCGAGTTGACTCGTGAATCGCTGGGATGCGACGCGGACGATGTTCTCATGGTGAACTTCGCGTTCAAGCTGAACAAGATTCCCGACGAGAGCGTCTCCACGGAAAACCCTCGGGACGAGCTTCTTCAGTGCCACCTTCTTTGA 366 0.5929 MTVKKGVLSPQRYPPSATCPPPASTCSAPPRTPSRHHPLRKQFSSFSRLGMAAPTTTRARASILSWTASTPQKIAELTRESLGCDADDVLMVNFAFKLNKIPDESVSTENPRDELLQCHLL 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00852 121 MobiDBLite consensus disorder prediction 14 28 - -
Gma20g00852 121 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00852 Gma-Chr20 34026907 34027272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00852 64 117 GRAS Transcription Factor Family AT5G52510 59.259 5.47e-16 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma20g00852 GRAS 5.3e-05 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00852 - - gmx:100808172 90.1225