Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00819 ATGTCGCTGCCAGATTGTCCCGCCGTCCAACTTGCCCAACTCCTGGGCCCAAATACCACAAACGCTGCCGCCGCCGCCTCCTTCATCTGCGACCGGTTCACCGCCGTGGACAACAAGTTCGTCGACACGGCCTTCGCGGTCGACAACACTTACCTCCTCTTCTCCGCCTACCTCGTCTTCTCGATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCCGCGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCCGGCGGCCTCTTCTACTACCTCTTCGGCTTCGCCTTCGCCTTCGGCTCCCCCTCCAACGGCTTCATTGGCAAACACTTCTTCGGCCTCAAGGAACTCCCCTCCCAAAGCTTCGACTACAGCAACTTTCTCTATCAATGGGCCTTCGCCATCGCCGCCGCCGGCATCACCAGCGGCTCCATCGCCGAACGCACACAGTTCGTGGCCTATCTCATCTACTCCTCCTTCCTCACCGGCTTCGTCTACCCCGTCGTCTCCCACTGGTTCTGGTCCGCAGACGGCTGGGCTTCTGCCATTTCCCCCGGAGACCGGCTATTTTCCACCGGCGTGATAGACTTCGCCGGCTCCGGCGTAGTCCACATGGTTGGTGGAGTAGCCGGCTTCTGGGGCGCACTGATAGAAGGCCCGAGAATCGGACGCTTCGACCACGCGGGACGCGCCGTTGCCCTCAGAGGCCACAGCGCGTCCTTAGTAGTCCTGGGGACCTTCATGCTTTGGTTCGGTTGGTACGGATTTAACCCTGGTTCATTTAATAAAATCCTAGTTTCCTACGGTAACTCAGGAACTTACTACGGTCAATGGAGCGCGGTTGGGAGAACCGCGGTCACCACTACCCTTGCAGGGTCAACTGCTGCGTTGACCACTCTCTTCGGGAAACGGATGATATCCGGTCATTGGAACGTGACCGATGTCTGCAACGGGCTGTTAGGCGGCTTCGCCGCCATAACAGCCGGCTGCTCCGTCGTTGAGCCATGGGCAGCCATCGTGTGTGGTTTTGTCGCTTCAGTGGTTCTGATAGCGTGCAACAAATTAGCAGAGAAGGTTAAGTTCGATGATCCTTTGGAAGCGGCGCAGTTACACGGTGGGTGTGGCGCGTGGGGGGTGATATTCACGGCGCTGTTCGCGAAAAAGGAGTATGTGAGCCAGGTTTATGGGGAGGGGAGGGCGCACGGGTTGTTCATGAGGGGTGGAGGGAAGTTGCTGGCGGCGCACGTGATTCAGATTTTGGTTATTGTTGGGTGGGTGAGTGCGACCATGGGACCCTTGTTTTGGGGGTTGAATAAATTGAAATTGTTGAGGATTTCTTCCGAGGATGAGCTTGCGGGGATGGATCTTACCCGTCATGGAGGATTTGCTTATGCTTATGAGGATGATGAGTCGCACAAGCATGGGATTCAGCTGAGGAAGGTTGGGCCCAACGCGTCGTCCACACCCACCACTGATGAATGA 1503 0.5768 MSLPDCPAVQLAQLLGPNTTNAAAAASFICDRFTAVDNKFVDTAFAVDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGSPSNGFIGKHFFGLKELPSQSFDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASAISPGDRLFSTGVIDFAGSGVVHMVGGVAGFWGALIEGPRIGRFDHAGRAVALRGHSASLVVLGTFMLWFGWYGFNPGSFNKILVSYGNSGTYYGQWSAVGRTAVTTTLAGSTAALTTLFGKRMISGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVASVVLIACNKLAEKVKFDDPLEAAQLHGGCGAWGVIFTALFAKKEYVSQVYGEGRAHGLFMRGGGKLLAAHVIQILVIVGWVSATMGPLFWGLNKLKLLRISSEDELAGMDLTRHGGFAYAYEDDESHKHGIQLRKVGPNASSTPTTDE 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00819 500 PANTHER AMMONIUM TRANSPORTER 5 493 - -
Gma20g00819 500 Pfam Ammonium Transporter Family 51 471 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gma20g00819 500 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 5 493 - -
Gma20g00819 500 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Gma20g00819 500 SUPERFAMILY Ammonium transporter 47 452 - -
Gma20g00819 500 TIGRFAM amt: ammonium transporter 48 471 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gma20g00819 500 Gene3D Ammonium transporter AmtB like domains 28 489 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00819 Gma-Chr20 33138479 33140649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00819 6 497 Inorganic Solute Cotransporters AT4G13510 80.876 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00819 K03320 - gmx:100818774 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01311 10 38986438 38988130 Gma20g00819 20 33138479 33140649 GST