Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00801 ATGATACAGTTCTTGCAAGAGAAAGGTAAGGTGGTTGCATTCATTGGAACAAGGTTGATTACTAGTTATATTTCAATTCTAAAGGTAGCTGATGTGGGGATAGTTCTTGATTCTGTGAGCAGGATAGTGGACAGAGATAGTTCTGACATAACTATCAAACGTTTCAATGCATTGGAACCAATTCTGATGGCTGGCAGAAGTAAATACCACAATATTCAAAACTTCATTCAACTTCATCTGACATTTACCATATCAGGGTTAGTCATAACATTGATTACAACAATATGTACTGGAGATTTCCCCCTTGCACAATTCCAGTTGATTTGGGTGAATGTTTTGGTGTGCATTCTGGGTGGTCTAATGATGGTAATGAAGTTAACCCACGAGGAACAGCTTGCCAAGCAACAATCTGCTCATAGGAACCATCCAATTATAACCACAGAAATTTGGAAAAGCATTGTTATTCAGGTTTTATATCAGGCTTCTGTGTCGATGATACTTGAGTTTGGGGGACATGTCACAGCTGACAGATTGTGCCTGCTTTTCAATCTGCTCAACATCATGCAGTTGTTGAAAAAGGAAGTTTTGAAGGTGGTTGTTCAGAGCTTCTGTTTCTTGGGGGCTTTAGGTGGTTGTTTTCTTATGCAAGTGCTGCTGATTGAGTATGCTAAAGGCCGAGCAGATTGCATGCGGCTGAATGCTACGAGATAG 711 0.4023 MIQFLQEKGKVVAFIGTRLITSYISILKVADVGIVLDSVSRIVDRDSSDITIKRFNALEPILMAGRSKYHNIQNFIQLHLTFTISGLVITLITTICTGDFPLAQFQLIWVNVLVCILGGLMMVMKLTHEEQLAKQQSAHRNHPIITTEIWKSIVIQVLYQASVSMILEFGGHVTADRLCLLFNLLNIMQLLKKEVLKVVVQSFCFLGALGGCFLMQVLLIEYAKGRADCMRLNATR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00801 236 Pfam Cation transporting ATPase, C-terminus 101 222 IPR006068 -
Gma20g00801 236 Gene3D - 29 178 - -
Gma20g00801 236 PANTHER CATION-TRANSPORTING ATPASE PLANT 1 235 - -
Gma20g00801 236 SUPERFAMILY Calcium ATPase, transmembrane domain M 49 222 IPR023298 -
Gma20g00801 236 PANTHER CATION TRANSPORTING ATPASE 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00801 Gma-Chr20 32676279 32676989 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00801 1 234 Primary Pumps ATPases AT3G63380 34.400 6.21e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00801 K01537 - gmx:102661547 303.523