Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00763 ATGGGTGCAAAGGGCACAAAAGAAGAAGGAAATCAGTGTAGAGGGAAGAGGGTTCAAAGGAGAAGGAAATGGAGAAACTGCACCTCAAAGCCTGAAACTACATCATCAATCATGAGAAAAAATGGCACTAAAGTTCAGAAGAGAACTCTCCAGTTGAATGACATGGCTGGCCGAAGTGTTGAGTTAACTCTATGGGGATGGTTGCAAACTATTTGTCATGCTGGGGAATTTCCAGTTTTGGCTACAAAAGTTGTCAGATCAAATGATTTCAATGGGAAGTCTGTCGGGACTATAGCCACTAGTCAGCTATATGTGGAGGCTGATTTTACTATCAATGCAGATACAGGATCACACTAA 357 0.4202 MGAKGTKEEGNQCRGKRVQRRRKWRNCTSKPETTSSIMRKNGTKVQKRTLQLNDMAGRSVELTLWGWLQTICHAGEFPVLATKVVRSNDFNGKSVGTIATSQLYVEADFTINADTGSH 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00763 118 Pfam Replication protein A OB domain 32 105 IPR031657 -
Gma20g00763 118 SUPERFAMILY Nucleic acid-binding proteins 28 109 IPR012340 -
Gma20g00763 118 PANTHER REPLICATION PROTEIN A SUBUNIT 34 109 - -
Gma20g00763 118 Gene3D - 27 114 IPR012340 -
Gma20g00763 118 MobiDBLite consensus disorder prediction 29 45 - -
Gma20g00763 118 PANTHER REPLICATION FACTOR A 1, RFA1 34 109 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma20g00763 118 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00763 Gma-Chr20 30505618 30507594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00763 34 109 Core DNA Replication Machinery Family AT5G45400 55.952 6.75e-25 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00763 K07466 - gmx:100778597 127.102