Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00762 ATGGGGAAGCAAATTCGCGAGAAAGAATGTGCATTGCCAAATCGAAATAGTCATCATACTCATCCAGGACGAGTATGGGGAATTCTTCACGTTATAAAGTACCATCATTGGCGTCAGGTCAAGAGAAGGCTTACACGCAGGAGGCATGGTGGCGAAAGACCCGATGCTAGAGCTAAAATTCCAGGAACTTCTGATGATTCAGGGGTTCACTCTATTCCAGAACATTATAAGCCACATACAGAACTATCTAATGTTGAAGAAAAGCCAGTATACTCCTCTCCACCAGCCAAAATTACTATCAAATCCCGATTAAGATCACTTCTTAATGAAGATATATACAGAAGGAAGAGTGGACACAAGAGAAGCTCAACCTGCCCTGCAAAGTCGCAACTAACTCATGCCAATTCTGTTCACAACTTAGAGGTTGATCTACTTGGTGAATTGTTACTAACTGTTCAGAGCCCTGACCCAGTCCTAGAAACCTTTCAAAACCATCTTGCTGCTGGTACATTGGATGAGTTGACACCAGTTTTATATGAGAAACCAATTGCCAACAATGACAAATGTGTAGATTGTGGAACAATGTTTTCTAAAGACATTTTGGAACATAGCAAGATTCATAAGCACTTGTGCTCTCCTAGTCAAGGTGGTCCTGAAGAGAAGTTGATGAATGCACAGATACTTACAACTGATGCTTCACCCCATCTTGTCAAGGACTTTCTTGATGCATTGGATGTGATCAACACAAACAAGGACTTCCTATTAGAATATATACAGGATCTAGGCTCTCATTTGCCATTCCACACTCATGATCAACAATCTTTCAACGGTAAACAGAGACGAGCCAAATCTCTCTCATTTCCTGTATCTGCCTCATCATCAGGAAGCCAAGATTCTGTTTCAGGCCAACTCATAAATCAAATGGTAGATTATTGGTTGGATTCAGAAGAAGAGAAGTTGCAAAATCAAAGTAACATGCAAAATACGAGCATGGATGAGTCCTCAGAAGATTCTCACCAACAGTCCTTACCATCAGGTTTTTCAAATAATTATGATCAATGGGGTGAAAGAGGTACTAATTCTCCATCAGTTTCATCCCATGTTCCCAACAATGTGAAAACTAGGCATTTCAGGGATCTTAGAAAGAAGATGAAGCACATAATTGAAGATGGAAGAAATGAAAAGCATCGCATTACCATGGATGCTATACTTGACAAAATTCCTTGTGGAAAGAGGCTCACAAAAAAAGTAAAAAAGTTTATCCACATCAAATCCAAAGACCCCACAGTTAAATGGGAAGATGAAGACCGTGCAACCAGCGGTTTTGGTAGCCATCTCTCTTCTAATTCCTTCAACAAGCATCAACCATCACCCATGAGGACTTCATTTCTAAAAGATTCAGCTGGTAGATATTCTCAGTTGTATCATCAGACTTGTTTTAACAGTGATGCCAAGTATCCTAAGGCTGAGAACTTAAGATTGAGAACAGAAGAGAGAAATTCAATATTAAAGACCCCAAAATCCTTTAAAAGGTTTCTTTCAATGCCTAATTTAAAATCTTACTTTCACCATAATGAGGAGCTGCCTTTACCTTTATCCCCCCAGAATTCAATCAAGAATTTTGGAGATAGAACAACAAGCACAAATGTCACTGATCAGCAACAAAGAAGTTTTGACAATAATGATGATTCAAAGAGTCAAATTTTACCACCTACATTTGTTGATAATATAAATCAAGACAGCAATTTGAATGTTGACCAAAAGCAACTTCTTGCCAGGAGTGCTTCAAAATCAAGATTAGATTTTAGTACTGAGGCAGAGGCAGATAAGAGCATAGGAATTGAAGGTTTAGGTGACTTGAGAGACAGTGAACAAGACATTGGAGCTAAAACAGAATCTATTGTGCCAGTGGAAGCAAGCTCAGTCTTCTCTTCTGACACTAGCTTCCTAGATTTTACATTTGATCTCGAGAACTTAAACATACAGGAAGAAGAATCAGACATAGAAATAAACCCAGGGCAAGGTGATGATGGATTGGATGATATGGCTGAGCATCAAGAGGCTAAAGAGGATCACCCTGAGAAGGTTGAGAATTTTCAAAACCTTGGAACTCTAAGCAAGCGTTTCAACTATGAAATTCCAAGTATTGAAGTGGATCCAAGTAATGAAGCTGCATTTAATTATGTGAGAAAGGTTTTAGAGCTTTCTGGGTTCACTGGCCATGATTCCCTTGGGATATGGTATTCTGATAACCAACCACTTGATCCTTCAATGTATGAAGAATTGGAGGGGTGCTTGCTTCTTGATCCTGATTGTTCTCGTAATAGTGAAGGTGGAGAATGTAATCATCATCTGCTTCTGTTTGATATAATCAATGAAGGGTTGCTGGAGATTTTTGGCAGATCTTACAACTATTATCCAAGACCATTGTCTTATCTCTCCCATGTTCACCCACTACCATCAGGAGAAAATGTTCTCTGTAAAGTGTGGACACTCATTAGCTGGTATCTGATGAACTCAACAACATCTGAGCTTTACCTATCATTGGATTATTATGTGAGCAAAGATCTTGCAAAATATGATGGGTGGATGAATCTCCAATTTGATTCTGAATGTGTGGGGCTTGAGCTAGATGACTTGATTTTTGAAGATCTATTGGAGGAAATAATCTCCACCTAA 2679 0.3904 MGKQIREKECALPNRNSHHTHPGRVWGILHVIKYHHWRQVKRRLTRRRHGGERPDARAKIPGTSDDSGVHSIPEHYKPHTELSNVEEKPVYSSPPAKITIKSRLRSLLNEDIYRRKSGHKRSSTCPAKSQLTHANSVHNLEVDLLGELLLTVQSPDPVLETFQNHLAAGTLDELTPVLYEKPIANNDKCVDCGTMFSKDILEHSKIHKHLCSPSQGGPEEKLMNAQILTTDASPHLVKDFLDALDVINTNKDFLLEYIQDLGSHLPFHTHDQQSFNGKQRRAKSLSFPVSASSSGSQDSVSGQLINQMVDYWLDSEEEKLQNQSNMQNTSMDESSEDSHQQSLPSGFSNNYDQWGERGTNSPSVSSHVPNNVKTRHFRDLRKKMKHIIEDGRNEKHRITMDAILDKIPCGKRLTKKVKKFIHIKSKDPTVKWEDEDRATSGFGSHLSSNSFNKHQPSPMRTSFLKDSAGRYSQLYHQTCFNSDAKYPKAENLRLRTEERNSILKTPKSFKRFLSMPNLKSYFHHNEELPLPLSPQNSIKNFGDRTTSTNVTDQQQRSFDNNDDSKSQILPPTFVDNINQDSNLNVDQKQLLARSASKSRLDFSTEAEADKSIGIEGLGDLRDSEQDIGAKTESIVPVEASSVFSSDTSFLDFTFDLENLNIQEEESDIEINPGQGDDGLDDMAEHQEAKEDHPEKVENFQNLGTLSKRFNYEIPSIEVDPSNEAAFNYVRKVLELSGFTGHDSLGIWYSDNQPLDPSMYEELEGCLLLDPDCSRNSEGGECNHHLLLFDIINEGLLEIFGRSYNYYPRPLSYLSHVHPLPSGENVLCKVWTLISWYLMNSTTSELYLSLDYYVSKDLAKYDGWMNLQFDSECVGLELDDLIFEDLLEEIIST 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00762 892 Pfam Domain of unknown function (DUF4378) 726 888 IPR025486 -
Gma20g00762 892 MobiDBLite consensus disorder prediction 319 376 - -
Gma20g00762 892 MobiDBLite consensus disorder prediction 271 300 - -
Gma20g00762 892 MobiDBLite consensus disorder prediction 319 371 - -
Gma20g00762 892 Pfam Protein of unknown function (DUF3741) 220 260 IPR022212 -
Gma20g00762 892 PANTHER PROTEIN TRM32 1 892 IPR044257 -
Gma20g00762 892 MobiDBLite consensus disorder prediction 669 694 - -
Gma20g00762 892 MobiDBLite consensus disorder prediction 43 92 - -
Gma20g00762 892 MobiDBLite consensus disorder prediction 532 572 - -
Gma20g00762 892 PANTHER TRM32-LIKE PROTEIN (DUF3741) 1 892 - -
Gma20g00762 892 MobiDBLite consensus disorder prediction 678 694 - -
Gma20g00762 892 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00762 Gma-Chr20 30456887 30461309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00762 1 882 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 29.792 8.54e-88 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00762 - - gmx:102667499 1761.89