Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00751 ATGGTGTTTGTTTGTGCATTTGTTTCAGGTTTCGTTTTTTTTTTTTTGGATTCTTTGCTTGATTTTGTGTCATATAAATCTTGTTGCTACAGTGAAGATATGGCAGAGGATATGAAAATTGATCATATTGTGGAAGTTCCTGATACCCCAGATAGAATAACTGTAAGGCGTGATGATCAGAAATATTTAGGTAATCCTGAGAAGAGGGGGAGAGCTTTTAATGCTGCTGATGAAAAGAATAACCACAGTAACTTTATAACATTGTCCCCATCAGAGGAATCTTATCCTTCTCAAAATGCTCCCATCTTTAGGAGAGCCCAAACTGATGGAGCTGAAAAGATGGAGAAAGGGAAAAGTATAAGCTCCAAGGTTCCTTCTAAATCATCTCATCGTGGTATTTCTATTTTAGATTTGACTGAAGAGAGTGGAAAGTTCCGACATCCGAAACCAGCTTTCTCACATCGTGGATCAAGAGATAATGCAACTGAAGACAAGAAAACACTAAAAGCAACTAATGGGAACTCTTTGTTGCCAATCATTTCTGATTCTTCTAATACATCTAGAAATGCCTTAACTGGAAAGTGTAAACTAGATATTAAAACACTTCCAGGTACTAATATATCTGTGGACCATGGCAAGGGTATTTCTCTGTCTAATGATTCTCAATCACAAAATGAAAAGGAAGTGTCGTTGCCTCCTCGTGTTTGTACCTCTCCACGAGGTAGAGGGCACAAGAGATTGGTACGAAATGGGTGCATTTCACCTCATAATATTGCAACAATGGAAAAACAATTAGCAGAACAGAGCAACCACCAAACTAAAGATGCTGAACAGAGTCATACTGGTCATTCGGTTTCTAGCAATACAGTGTCACCGGTTAGTGTTGATGACTTAGTTGCTGAAGAGAGAGGCGATGGTAGAGGGAAAGGAAAGGAAATACTTGTTCATCCTTCATCTCATAATAGACTGACTTTTCGCACTGCTGCCAGCCCTGTGACCAATTATGAAGAGATCAATGGTCCCAGTAATGCTATAAGAAATCCACTTCAATACTCTGGGGGCCAAGGTGGTTGGAGAACTACACATAATGAGAGGAATGCTAATCAGCCCTCTAATGATGTAAATGGGCATCATTCAAGGAGAAGTGATGATATTGGAAGATTTAATTATAGACAGAATACAAACAGAATGGACAGAAGAAACACTGGGAGTGGTCAAAGCAGCAAGCATGTACATGTTTCTCAATCAGATCATACAGCTCAACCAACTTCTGTGTTCATTCCATATGTGGACCAGTCATCTAGAGCCCATCCTACTGCTGACATTCTGACCAAAAGGCAAAGGAAACGTGAATCACCTTCAGGGATTATGTTCCTCGGTTCAACTGGGGAATCATCAAGCTCATCCCAGAACCCTGAAGTGATTGAGTTGTTATCTACACCAAGGGGTTCATCAAACTCATCCCGGAGCTCTGTCTTGGATCATGAAGTGGTTGATTTGTTATCCACACCAAGGTATGCCAACAGATCATCTGAAGATTTAGATGATAATGACAATAGCTCGGAAGCTCGGGCACGGCAAATGGAAGCAGATGAGAGATTGGCACGTGAACTCCAAGAACAACTGTATCATGATGATCCTTTTGAAGGCAGAGGGATTGATGAAGATTTAGCATGGGACCTGCAGCGTGCAGAGGCTCTTCTGCGTACAACTATTGATAGCCACAGCATGAATCAACCTACACAGCTTCCAAGGGCAAATAGACAGTCTCGCACACGGTTTCAACAAAACCCTTCTAGAAGGAGAGCTATGGCTCAAGCTTCTTTCTCTAATAGAATGTCACAGTGGAGGAGTCGTTCTACAAGTCGGACCCGGGCACCTAACACATCATCTAGGGGAAGAGGCCCCCAGTTTCCTTTGGATATGGACTTAGATATGAGACTTGATATATTGGAAGCTTTAGAGGATTCAATAGGGGATTTCAGCGATATGGGAATGGCTGATGACATCTTTAATGCACGTCGTGATTTCACTGACGCTGATTATGAAATGCTATTAGCCCTTGATGAGGGAAATCACCAGCATACTGGTGCATCTGCCAATCTGATCAATAGCTTGCCGCAGTCCACCATCCTGACTGACAACTTCACAGATGCATGTGCCATATGTCTTGAGATCCCTGTCCAAGGAGAAACTATTCGCCACCTTCCTTGTTTGCACAAATTTCACAAAGATTGTATCGATCCTTGGTTGCAGAGGAAAGCATCATGTCCGGTGTGCAAGTCATCCATCACCTAA 2298 0.4208 MVFVCAFVSGFVFFFLDSLLDFVSYKSCCYSEDMAEDMKIDHIVEVPDTPDRITVRRDDQKYLGNPEKRGRAFNAADEKNNHSNFITLSPSEESYPSQNAPIFRRAQTDGAEKMEKGKSISSKVPSKSSHRGISILDLTEESGKFRHPKPAFSHRGSRDNATEDKKTLKATNGNSLLPIISDSSNTSRNALTGKCKLDIKTLPGTNISVDHGKGISLSNDSQSQNEKEVSLPPRVCTSPRGRGHKRLVRNGCISPHNIATMEKQLAEQSNHQTKDAEQSHTGHSVSSNTVSPVSVDDLVAEERGDGRGKGKEILVHPSSHNRLTFRTAASPVTNYEEINGPSNAIRNPLQYSGGQGGWRTTHNERNANQPSNDVNGHHSRRSDDIGRFNYRQNTNRMDRRNTGSGQSSKHVHVSQSDHTAQPTSVFIPYVDQSSRAHPTADILTKRQRKRESPSGIMFLGSTGESSSSSQNPEVIELLSTPRGSSNSSRSSVLDHEVVDLLSTPRYANRSSEDLDDNDNSSEARARQMEADERLARELQEQLYHDDPFEGRGIDEDLAWDLQRAEALLRTTIDSHSMNQPTQLPRANRQSRTRFQQNPSRRRAMAQASFSNRMSQWRSRSTSRTRAPNTSSRGRGPQFPLDMDLDMRLDILEALEDSIGDFSDMGMADDIFNARRDFTDADYEMLLALDEGNHQHTGASANLINSLPQSTILTDNFTDACAICLEIPVQGETIRHLPCLHKFHKDCIDPWLQRKASCPVCKSSIT 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00751 765 MobiDBLite consensus disorder prediction 121 135 - -
Gma20g00751 765 SMART ring_2 720 760 IPR001841 -
Gma20g00751 765 MobiDBLite consensus disorder prediction 279 294 - -
Gma20g00751 765 MobiDBLite consensus disorder prediction 109 170 - -
Gma20g00751 765 MobiDBLite consensus disorder prediction 140 166 - -
Gma20g00751 765 MobiDBLite consensus disorder prediction 336 422 - -
Gma20g00751 765 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 521 763 - -
Gma20g00751 765 CDD RING-H2_PA-TM-RING 720 761 - -
Gma20g00751 765 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 687 765 IPR013083 -
Gma20g00751 765 SUPERFAMILY RING/U-box 714 764 - -
Gma20g00751 765 MobiDBLite consensus disorder prediction 265 295 - -
Gma20g00751 765 MobiDBLite consensus disorder prediction 210 243 - -
Gma20g00751 765 ProSiteProfiles Zinc finger RING-type profile. 720 761 IPR001841 -
Gma20g00751 765 Pfam Ring finger domain 719 761 IPR001841 -
Gma20g00751 765 MobiDBLite consensus disorder prediction 571 635 - -
Gma20g00751 765 MobiDBLite consensus disorder prediction 458 473 - -
Gma20g00751 765 MobiDBLite consensus disorder prediction 437 473 - -
Gma20g00751 765 PANTHER - 521 763 - -
Gma20g00751 765 MobiDBLite consensus disorder prediction 336 375 - -
Gma20g00751 765 MobiDBLite consensus disorder prediction 388 422 - -
Gma20g00751 765 MobiDBLite consensus disorder prediction 503 531 - -
Gma20g00751 765 MobiDBLite consensus disorder prediction 509 531 - -
Gma20g00751 765 MobiDBLite consensus disorder prediction 211 231 - -
Gma20g00751 765 MobiDBLite consensus disorder prediction 571 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00751 Gma-Chr20 29644697 29668363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00751 675 761 C3H Transcription Factor Family AT3G55530 36.975 7.19e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00751 - - gmx:100796218 1384.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01227 10 35769987 35778218 Gma20g00751 20 29644697 29668363 GST