Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00745 ATGGATGATATGGACATGGATATTCCCCTCCCCGAAGAACTCGAATTTCTCGAATCAAATTCTCATTTTGCCGAACAAGAACAAGAAGAAGAAGACCATCACTATTACTTCCCAGACCTAGACCCCGCCGCCGAATTTCTTGAATCAAATTCTCAACAATCGCCGTCGCCGCAAGATCTCGCGGTTCCTTCGGCGGAGCCCGAATTCAACGGCCACAAGCGATCGCGTCCGCCTTCTCCAGAAGAGAAGAGAGCGAAGGTTAGGGTTGCCGTCGAGGAGGATTTCGCCGTGGCCGACGAGGACTGGCCCCGGTACTCTCCTCCGCCGGCTCCTCCGGAGCAGGCGATGGAGGAAATGATGTTCGAGAAGGAGAAGACACTGTCGAGATTCGCCTCGGAGATTGACGGCGAGTGCATGCCGATCACCGCGCCCAGCGGCAACAGGGTTTACGCGAAGCTGAACCGGTTCCAAGGAGAGGAGCGCGTCACGAAGCTTGATTACAATGGATATTCTGCTGAGCTTAGTTCAGAACCAGTTAATGTTATACTTGAGAGGTTGGAGCAAGAGGCTTTCGCTAAGGCCTTGGAAGCTAGTTCTGAAGGCAAAAGTGTTCTAGACATTCCTGAAGCACAAACGGTTCATGAGCGACTTTGGGTTGATAAATATGCTCCAAAATCATTTACCGAGCTTCTCAGTGATGAACAGACAAATCGCGAGGTACTCTTGTGGTTGAAACAATGGGATTCTATTGTGTTTGGATCTGAAATTCGAAGCACATCAGATGATGTTTTGTCATCTTTGAAACGACATTCTTCTATTGTCCACAATCAGAAACCATTGAATTCAAAGTTTCCAAGGATGAATGGAGGACCCAAATGGAGTAATGGGAGGAGGTATATAAATGCTAGAAGTATGGATGAGAGTGGTAGTTCAAAGAGTATTCAAGATGTATGGAATGCAAAGTCAAGGAATATTGGTCCTCCAGAACAAAAGATCCTTCTGCTCTGTGGATCACCAGGTCTTGGAAAAACAACACTTGCCCATGTAGCTGCTAGGCACTGTGGATATCATGTGGTGGAGGTCAATGCTAGTGATGATCGTTCAACAGCATCAATTGAAGCCAAAATCCTTGATGTGGTCCAGATGAACTCTGTCTTGTCTGACTCAAGGCCAAAGTGTCTGGTGGTGGATGAAATTGATGGAGCTCTTGGTGATGGCAAGGGTGCTGTGGAGGTTCTTTTAAAGATGATTTCTTCCGAAAGGAAGCCTGATGCTGGGAAACAAAGTTTTGGCAAAGGACAGCAGGAAAGGAAGTCATCAAAAAAGGGTTCGAAAGCAGCTTCACTTTCAAGACCTGTGATTTGCATTTGTAATGACCTATATGCACCTGCCTTAAGACCATTACGTCAGGTAGCCAAGGTTCATATATTTGTTCAACCAACGGTTAGTCGTGTGGTAAACAGGCTGACATATATATGTAACAAGGAGGGGATGAAAGCCAGTGCAATTGCACTAACTGCTCTAGCAGAATATACAGAATGTGATATTAGATCATGCTTGAACACTCTCCAATTTCTCTCCAAGAAGAATGAGGCCCTCAATGTGTTTGATATTGGTTCTCAAGTTGTTGGCCAGAAGGACACGTCAAAGAATGTTCTAGACGTCTGGAAAGAGATATTCCACAAGAGAAGAACAAAAAAGACGGAAAGAAAATCTCATAGAGGCAAGTCCTTTGAATTTGACTCCTTGTACTCCCTTGTTTCAAACCGTGGTGATAGTAACTTGATTCTGGATGGAATTCATGAAAATGTTTTGCAGCTCAATTATCATGACCCAGTAATGCAGAAAACTGTCAAGTGCTTCGACAATCTTGGAGTTTATGATCTAATGCATCAATATATAATGCATACACAACAGATGCCCCTGTATGGTAAGAAGATAATTTATCTACTTAATACTGTTAACAAGTTAAATCTCACTCTTGTTTCTCTATCTTTCCTTTCATCAGTATATTTGCCCCTAGTAGCAATTACTGTACATCATATAGTATCTCAAGTTCAGAAACCAAACATTGAGTGGCCAAAATCACATCAGAGATATCGTACCATGATGATGGAAAAGATGGACATTTTGAATACCTGGCACCACAAAATCCCACCGTATATTGCAAGGAACTTATCAGCTAGTTCCTTTGTTGAAGACTTAATTTCTCCATTATTACATATTTTGTCCCCACCAACTGTAAGACCGGTAGCATTTCAATTACTATCAGATAAGGAGCAGAATGATCTTGCTCAATTAGTTAGCACAATGGTATCATACACTATAACATATAAAACTTTGAAATCAGATATTCTGCCTCAAACCCAGAGGTGTGAAGTAGCTGATGGCTTGGCACTGTCTCTTGTTCCTCCTATTAGCGACTTTATAAATTTCAAGGATTATACTTCAAACCATTATGTGCTTTCTGTAGCTATGAAGCAGGTTTTGGTTCATGAG 2499 0.4282 MDDMDMDIPLPEELEFLESNSHFAEQEQEEEDHHYYFPDLDPAAEFLESNSQQSPSPQDLAVPSAEPEFNGHKRSRPPSPEEKRAKVRVAVEEDFAVADEDWPRYSPPPAPPEQAMEEMMFEKEKTLSRFASEIDGECMPITAPSGNRVYAKLNRFQGEERVTKLDYNGYSAELSSEPVNVILERLEQEAFAKALEASSEGKSVLDIPEAQTVHERLWVDKYAPKSFTELLSDEQTNREVLLWLKQWDSIVFGSEIRSTSDDVLSSLKRHSSIVHNQKPLNSKFPRMNGGPKWSNGRRYINARSMDESGSSKSIQDVWNAKSRNIGPPEQKILLLCGSPGLGKTTLAHVAARHCGYHVVEVNASDDRSTASIEAKILDVVQMNSVLSDSRPKCLVVDEIDGALGDGKGAVEVLLKMISSERKPDAGKQSFGKGQQERKSSKKGSKAASLSRPVICICNDLYAPALRPLRQVAKVHIFVQPTVSRVVNRLTYICNKEGMKASAIALTALAEYTECDIRSCLNTLQFLSKKNEALNVFDIGSQVVGQKDTSKNVLDVWKEIFHKRRTKKTERKSHRGKSFEFDSLYSLVSNRGDSNLILDGIHENVLQLNYHDPVMQKTVKCFDNLGVYDLMHQYIMHTQQMPLYGKKIIYLLNTVNKLNLTLVSLSFLSSVYLPLVAITVHHIVSQVQKPNIEWPKSHQRYRTMMMEKMDILNTWHHKIPPYIARNLSASSFVEDLISPLLHILSPPTVRPVAFQLLSDKEQNDLAQLVSTMVSYTITYKTLKSDILPQTQRCEVADGLALSLVPPISDFINFKDYTSNHYVLSVAMKQVLVHE 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00745 833 MobiDBLite consensus disorder prediction 23 85 - -
Gma20g00745 833 Pfam ATPase family associated with various cellular activities (AAA) 333 459 IPR003959 GO:0005524|GO:0016887
Gma20g00745 833 MobiDBLite consensus disorder prediction 23 39 - -
Gma20g00745 833 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 669 833 - -
Gma20g00745 833 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 4 644 - -
Gma20g00745 833 MobiDBLite consensus disorder prediction 423 445 - -
Gma20g00745 833 Gene3D - 480 550 - -
Gma20g00745 833 CDD AAA 328 422 - -
Gma20g00745 833 CDD HLD_clamp_RFC 480 538 - -
Gma20g00745 833 MobiDBLite consensus disorder prediction 69 85 - -
Gma20g00745 833 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 528 IPR027417 -
Gma20g00745 833 SMART AAA_5 329 483 IPR003593 -
Gma20g00745 833 Gene3D - 215 478 IPR027417 -
Gma20g00745 833 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00745 Gma-Chr20 29250128 29310531 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00745 330 527 Core DNA Replication Machinery Family AT5G22010 30.986 4.41e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00745 K11269 - gmx:100791474 1551.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01214 10 35415329 35468493 Gma20g00745 20 29250128 29310531 GST