Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00743 ATGGAGTTTAAGCACCATGAGAAAACTGAGTTGAGCATGCCCGCAGCAACAGCGAGTCACAACGACTTTGGAATACCGCCCTCAAGTCAAGGCGAAGAGGAGCCAGTGGCGGCGGCGATACCAGTGGCGATTCCAGTGACCCCAACACCACCCACCTTGGCTCAAAACAACGACAATGAGAAGTATCATGAGTGCCTTAAGAACCACACCGTCAAAACTGGCGTCCACACACTTGATGGATGCATCAAGTTCTTGCCTCTAGGTGAGGAGGGAACCCTGGATGCGCTAAAATGCCTCGTGTGCAACTACCACCGAAACTTCCATCGTAAGGAGACCCCCAATGACACCTACCTGGTGCCCTACTACCACCACTCGCCGTTGCCATTGGCAGCGTACTATGGGGAGCAGATGGGCTACCCCCGTGTGCAAGGGCAACAATGCACCACACTGGCACTCCCCTCCAGGTCAAGGGGTAGTGGTGGGGCCCAGTCCTCGAGGGAGGACATGGAAGCAGTGTCAGACCCAACGAGTGCCACTCCTCATGGCGGGTCCAGCAAGAAGCGTTTCAGGACTAGGTTCACCCTAGAGCAAAAAGAGAAGATGTTGGCCTTTGCAGAAAAGCTTGGTTGGAGGATTCTGAAGAACGATGAGAGTGTCGTGCAGGAGTTTTGTGCCCAAACTAGCATCCTACCTCATGTGCTTAAGGTGTGGGTGCACAACAACATGCACACCTTAGGTAAGAAGCTATAG 750 0.536 MEFKHHEKTELSMPAATASHNDFGIPPSSQGEEEPVAAAIPVAIPVTPTPPTLAQNNDNEKYHECLKNHTVKTGVHTLDGCIKFLPLGEEGTLDALKCLVCNYHRNFHRKETPNDTYLVPYYHHSPLPLAAYYGEQMGYPRVQGQQCTTLALPSRSRGSGGAQSSREDMEAVSDPTSATPHGGSSKKRFRTRFTLEQKEKMLAFAEKLGWRILKNDESVVQEFCAQTSILPHVLKVWVHNNMHTLGKKL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00743 249 MobiDBLite consensus disorder prediction 151 187 - -
Gma20g00743 249 Gene3D - 171 246 - -
Gma20g00743 249 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 52 248 - -
Gma20g00743 249 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 52 248 - -
Gma20g00743 249 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 61 111 IPR006456 -
Gma20g00743 249 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 62 111 IPR006456 -
Gma20g00743 249 Pfam ZF-HD protein dimerisation region 60 112 IPR006456 -
Gma20g00743 249 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 186 241 IPR006455 -
Gma20g00743 249 MobiDBLite consensus disorder prediction 1 34 - -
Gma20g00743 249 MobiDBLite consensus disorder prediction 169 184 - -
Gma20g00743 249 SUPERFAMILY Homeodomain-like 173 247 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00743 Gma-Chr20 29190767 29191516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00743 61 245 ZF-HD Transcription Factor Family AT4G24660 48.148 4.90e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Gma20g00743 ZF-HD_dimer 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00743 - - gmx:100789893 491.115