Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00735 ATGGAGGGTAAGAACATGAGCAAGGTGATCAAATTGGTGAATGAGATAGCCAGCATCTCCGAGTACAAGCCTCCGGTGAAGAAGCAGTACTGCAACTTGGCACGGAGGCTGAAGCTTTCAACCCCGATGTTCGAGGAGATTAGGGACATGAAAAAAGATGCGCTTCCCGAGGACACTTCCAACGCCGTCCTCACCTTCAAGGAAGCTCTCCAATCCGCTAGGGAACTCCTCAAATTTGGAAGCGAAGGCAGCAAGCTTTACTTGGTAATGACTTGTAGGCCAAGGTCAGATCTTTTAATGAATCTTCCAACTCTGCGCAAACTTGACAGCATGCTTCTTGTTAGTGTAGGATCTTACTTTCATTGTGTGCTAGTAGAGTAG 381 0.4724 MEGKNMSKVIKLVNEIASISEYKPPVKKQYCNLARRLKLSTPMFEEIRDMKKDALPEDTSNAVLTFKEALQSARELLKFGSEGSKLYLVMTCRPRSDLLMNLPTLRKLDSMLLVSVGSYFHCVLVE 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00735 126 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 82 118 IPR005512 GO:0005085
Gma20g00735 126 ProSiteProfiles PRONE domain profile. 1 126 IPR005512 GO:0005085
Gma20g00735 126 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 5 91 - -
Gma20g00735 126 Gene3D - 4 111 IPR036537 GO:0007166
Gma20g00735 126 PANTHER U BOX DOMAIN-CONTAINING 5 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00735 Gma-Chr20 28714379 28715467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00735 9 90 U-box Gene Family AT3G46510 56.098 7.39e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00735 - - gmx:100812160 159.458