Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00725 ATGGCTCCTACACTTCAACATGCACTTTCTCATCTACTCACTCTCGTAGTTTCACTATCAATACTCCTAGTGGTACCCTCCTCTTGTTTCAACCCCAAAAAGATTGTGAATGCTTCCTATGCTTCATGCTCATATGGTTCAGATTGGTCACCTGCTATAGCCACTTGGTATGGACTTGCCAAAGGGGACAGTAGTGAAGGTGGTGCTTGTGGTTATGGCAGTGCTGTTGGGGAACCTCCTTTCTCATTATTGATATCGGTGGGAAGCCCTCTTTTGTTTGAATCAGGCAAAGGTTGTGGTTCTTGTTATGAGATTAACGTAGAAGAAGAGGGGTTGCTTGGAGTTAGAGACCTGAATGCGATTCTTCTTATACGAATCAAAGATGTTGATGTTGTTCACTCCCTCTGTTATGTCAAGAGTTGCACAAACTTGAAATATGGAAAATTTAGAAACATAAAACTGAAGTTGGCCTACCAAATGATGAGATCAAAGATGTTGCAGTTAGTGAATTTTAAATCAACAGTAAGGAGAAAGCACTGA 540 0.4111 MAPTLQHALSHLLTLVVSLSILLVVPSSCFNPKKIVNASYASCSYGSDWSPAIATWYGLAKGDSSEGGACGYGSAVGEPPFSLLISVGSPLLFESGKGCGSCYEINVEEEGLLGVRDLNAILLIRIKDVDVVHSLCYVKSCTNLKYGKFRNIKLKLAYQMMRSKMLQLVNFKSTVRRKH 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00725 179 Gene3D - 31 163 IPR036908 -
Gma20g00725 179 PANTHER EXPANSIN-B3 14 108 - -
Gma20g00725 179 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Gma20g00725 179 PRINTS Expansin/Lol pI family signature 48 63 IPR007118 GO:0005576
Gma20g00725 179 PRINTS Expansin/Lol pI family signature 89 107 IPR007118 GO:0005576
Gma20g00725 179 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 67 105 IPR007112 -
Gma20g00725 179 SUPERFAMILY Barwin-like endoglucanases 48 110 IPR036908 -
Gma20g00725 179 PANTHER EXPANSIN-B2-RELATED 14 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00725 Gma-Chr20 27947337 27949964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00725 29 105 Expansin Gene Family AT1G65680 59.740 6.30e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00725 - - gmx:102664373 193.741