Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00719 ATGAATTCTAGTTTACGTACACACACAATTTTAGTATATGAAGCACTTGGTTCCTTTGTGCTATGGTCGTTGGACAACATTGTTGCAGACCTTGCCAGCCATCAAGGAGTTGTTAAGGGATATAAGAAGGCAGTCCAACAATCATCATCGAAATCTCAGGTGTTTTCTTTTGATGTTGTGGATTTTGATGGTGGAGAAATTCGGGCAACTTGCTTCAATGTTGTGGCTGATCAGTTCTACAATGTTATTGAAGCTAGTAAGGTATATCTAATTTCCAGGGGAAGCATAAAGCCAGTTCAGAAGAATTTTAATCACCTTCACAATGATCAAGCGCTGACCCTTGATGTGGCATCAATTATACAACCATTCCTTGATGATAATGACTCAATTACATCACAAAAATTTAATTATCGCCCCATTAGTGAAATTGAAAGTTTGGAAAACAACAACATTATGGATGTGATTGAAGGACAAAGGTTGAAAACTATTTGTCATGTTGGGGAATTTCCAGTTTTGGCTACAAAAGCTGCCAGATTAAATGATTTCAATGGGAAGTCTGTCAGGACTATAGCCACTAGTCAGCTATATGTGGAGGCTGATTTTCCTGAGGTTTGTACACTAAAAAGATTGTTTGAAAATGAAGGGAAGAGTGTCCCAACTCTTTCTATTTCCAGAGAAATGTCTAATCTAGGTAAGACTGATGTGCGGAAGACTATATCTCAAATTAAAGATGAGAAGTTAGGGACTTTAGAGAAGCCTGATTGGATATCTGTCTTTGTAGCTGTTTCACACATTAAGGTTGATAACTTCTGTTACCTCGGGTGCCCTCTCAAGATAAGGGATAGACAAT 850 0.38 MNSSLRTHTILVYEALGSFVLWSLDNIVADLASHQGVVKGYKKAVQQSSSKSQVFSFDVVDFDGGEIRATCFNVVADQFYNVIEASKVYLISRGSIKPVQKNFNHLHNDQALTLDVASIIQPFLDDNDSITSQKFNYRPISEIESLENNNIMDVIEGQRLKTICHVGEFPVLATKAARLNDFNGKSVRTIATSQLYVEADFPEVCTLKRLFENEGKSVPTLSISREMSNLGKTDVRKTISQIKDEKLGTLEKPDWISVFVAVSHIKVDNFCYLGCPLKIRDRQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00719 283 Gene3D - 223 280 IPR012340 -
Gma20g00719 283 SUPERFAMILY Nucleic acid-binding proteins 36 129 IPR012340 -
Gma20g00719 283 SUPERFAMILY Nucleic acid-binding proteins 236 277 IPR012340 -
Gma20g00719 283 PANTHER REPLICATION FACTOR A 1, RFA1 156 283 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma20g00719 283 PANTHER REPLICATION FACTOR A 1, RFA1 50 156 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma20g00719 283 CDD RPA1_DBD_A 39 122 - -
Gma20g00719 283 PANTHER REPLICATION PROTEIN A SUBUNIT 156 283 - -
Gma20g00719 283 PANTHER REPLICATION PROTEIN A SUBUNIT 50 156 - -
Gma20g00719 283 Gene3D - 156 222 IPR012340 -
Gma20g00719 283 Gene3D - 35 125 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00719 Gma-Chr20 27598327 27606218 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00719 42 282 Core DNA Replication Machinery Family AT4G19130 48.276 3.26e-86 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00719 K07466 - gmx:100778597 382.104