Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00717 ATGGGAATGGCGGTGGCGAGTGACGATTTGCTGAGCAAGAAAGCTGCGGCGATGAGAGCGTCTCTGGAGAGAAGCCAAGCCATCACAGACGACGTCGTCTCGATTCTCGGCTCCTTCGATCACCGCCTCTCCGCCCTCGAAGCCGCCATGCGCCCCACCCAGATCAGAACACATTCTATTCGGAAAGCCCATGAGAATATTGATAGGACTTTGAAGTCTGCAGAGGCCATATTGGCTCACTTTGATCAATATTATCAGGCAGAAGCAAAAATAGTTAAAGGACCACATGAAGATGTGAAGAACTATCTTGAAGCAATTGATCAGCTGAGAAGAAACATTAGATTTTTTGGTAATAAGAAGGGTTTTAAGAATGATGATGATGTTGTCATCCGTGCCAACAATTTGATAAGCGAAGCTATTTCTAAGCTAGAAGATGAATTTAAGCGGCTATTATCATCTTACAGCAAACCTGTGGAACCTGAGTGCCTCTTTGGTTCTCTTCCAAACTCAATGCGACCTTCAGCAGCATCACCAGGTCGTGATGGTGATCCTAATGGAAAGAATCATTCTTCTAATTTCCATTCTGAGTTACATAAAAATAATGCTGATGCTGTTCAATACACACTTCCTGTTCTTATACCACCAAGAATTTTGCCGCTGCTCAATAATTTAACCCAGCAAATGGTTCAAGCTGGTCACCAACAACAGTTGCTCAAAGCATACAGAGATACCCGTTCTAAAGTATTGGAAGAAAGCCTGCAAAAGCTTGGAGTTGAAAAACTAAGCAAAGATGATGTTCAAAAGCTACAATGGGAGGTTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATTGCTGTAAGACCACTGTCAAATTTGTTCACATATTTTATCTTTATATTTTCATTTAAATATGCAATTGTACTTGAACAGGTCAAATTGTTGTTTGCTGCGGAACGGAAAGTTTGTGATCAGATATTTGAAGGATTTGACTCACTTGGTGATCAGTGTTTCGCTGAAGTAACTACAAACAGTATTTTCATGCTACTTAGTTTTGGAGAAGCAATTGCTAAAAGCAAGAGATCACCTGAAAAGTTATTTGTACTTTTGGACATGTACGAAATATTGCAAGAGATACATTCAGAGATTGAAATACTCTTTAAAGGCAGAGCTTGCACTAAAATAAGAGAAGCTGTAATGGGTTTGGCAATACAGCTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAGAAAGATGCTACAAAGACTGCAGTAACTGATGGAACTGTCCATCCTTTGACAAGCTATGTGATTAACTATGTGAAGTTTTTATTTGACTATCGATCTACCTTACACCAACTTTTCCAAGGAATTGAAGGTGATTCTTCACAGCTAGCATCTGTGACAATGCGGATATTGCAAGCTCTCCAAACCAATTTAGATGGGAAATCAAAGCACTATAGAGACCCTGCTTTGACACATCTATTTCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGGTCTGAAGCGAAGGACTTGTTGGGGGACGATTGGATACAACGACATAGGAAGATTGTGCAACAGCATGCCAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTCCCTCTCTATTCAGGGCCTCATCTCATCAAGTGGTGGTGGTGGTGGTAGTACTGCTAGTGGCGATGCAGGGAGTAGTGGTGCTTCAAGAGCAATTGTTAAAGACAGGTTTAAGACATTCAATACTATGTTTGAGGAACTTCATCAGAAACAATCTCAGTGGACAGTACCAGACACAGAGTTGCGTGAGTCTCTTATTCTTGCAGTTGCTGAAGTCTTGCTGCCTGCCTACAGATCATTTGTGAAACGTTTTGGGCCACTAGTGGAGAATGTAAAGAGTACTCAGAGGTACGTCAAATACACTGCTGAAGATCTAGAGCGAATCTTAGGTGAGTTTTTTGAAGGAAAAAACATGAATGATAATAAGCGGTAA 2031 0.4082 MGMAVASDDLLSKKAAAMRASLERSQAITDDVVSILGSFDHRLSALEAAMRPTQIRTHSIRKAHENIDRTLKSAEAILAHFDQYYQAEAKIVKGPHEDVKNYLEAIDQLRRNIRFFGNKKGFKNDDDVVIRANNLISEAISKLEDEFKRLLSSYSKPVEPECLFGSLPNSMRPSAASPGRDGDPNGKNHSSNFHSELHKNNADAVQYTLPVLIPPRILPLLNNLTQQMVQAGHQQQLLKAYRDTRSKVLEESLQKLGVEKLSKDDVQKLQWEVLEAKIGNWIHFMRIAVRPLSNLFTYFIFIFSFKYAIVLEQVKLLFAAERKVCDQIFEGFDSLGDQCFAEVTTNSIFMLLSFGEAIAKSKRSPEKLFVLLDMYEILQEIHSEIEILFKGRACTKIREAVMGLAIQLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLHQLFQGIEGDSSQLASVTMRILQALQTNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWIQRHRKIVQQHANQYKRNAWAKILQSLSIQGLISSSGGGGGSTASGDAGSSGASRAIVKDRFKTFNTMFEELHQKQSQWTVPDTELRESLILAVAEVLLPAYRSFVKRFGPLVENVKSTQRYVKYTAEDLERILGEFFEGKNMNDNKR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00717 676 MobiDBLite consensus disorder prediction 165 195 - -
Gma20g00717 676 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 292 IPR004140 GO:0000145|GO:0006887
Gma20g00717 676 PANTHER EXOCYST COMPLEX PROTEIN EXO70 313 672 IPR004140 GO:0000145|GO:0006887
Gma20g00717 676 Pfam Exo70 exocyst complex subunit 312 663 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma20g00717 676 SUPERFAMILY Cullin repeat-like 77 667 IPR016159 -
Gma20g00717 676 Gene3D Exocyst complex component Exo70 185 676 - -
Gma20g00717 676 Gene3D Exocyst complex component Exo70 75 178 - -
Gma20g00717 676 Coils Coil 99 119 - -
Gma20g00717 676 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 292 - -
Gma20g00717 676 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 313 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00717 Gma-Chr20 27493865 27545995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00717 3 676 EXO70 exocyst subunit family AT5G03540 66.193 0.0 903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00717 K07195 - gmx:100797989 1200.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01184 10 33931577 33947600 Gma20g00717 20 27493865 27545995 GST
Gma19g01654 19 45923210 45925066 Gma20g00717 20 27493865 27545995 PCT
Gma03g01608 03 42290109 42291626 Gma20g00717 20 27493865 27545995 PCT