Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00716 ATGTTCGTCATCATTCTTTTGTTGCTCTCTAACTTGCTGATCCAAACTCAAAGTGGCGCAAGCACTGTGGTAATTGACCCCAACACTTTCTCCTTTGTTACTTTCACTCCTGAGAGTTGCACCAATGGTGAGTTGCTTTGCATGGGTTCAGCCACTGCTGGAAATGGGTACTTGAGTCTCACTCCAGAGCCACAACAAAGTGGCAATTCGAGTTCGTCATTGTCTAACACAACAAACAATGTTGGAAGGGTTTTATACCCTCTTCCTGTGAATGTTTGGCCAGCAATTATCTCCACCACATTCACTGTTAGGATCACTCCTTTTTCAGAAAATTCAACCGGCTCTGGGGATGGAATGGCACTAGTGTTTGCACAAGATAACAGGCCCTCACCAAATGCTAGCTATGGCTCATATCTTGGAATGTTTGATCAGTCTACACAAGGAGGGGGTTTTCAACAAATAGCTGTGGAGATGGACACTTTCATGAATGAATTTGATCTAGATGGAAACCACATTGGGATAGTCACAACAAGCATCACAAATCCACTTGCATCTGAGAGTCTCAATAGCTCTGGCATTGACCTCAAAAGTGGAAGAGACATTGAGGTCAAAATTGACTATGATGGATGGAGTAAAATGATTTTTGTCTCTGTGGGATACTCTGAAAGCCAATTGAAGAGTGTCCTTAACCATTCAATTAACCTACCAGACATAGTTCCAAGCTCCATTTATGTAGGTTTCACAGCCTCCACAGGCAACACTTTTCCCGAAAGCCACCAAGTCCTCAATTGGGTATTCACATCAGTGCCACTGCCTATTCTTTCAGCTGAACACACTAAAGTTGGCACCATCAAGACCATATTGGTAGTTGTCGCGGTATGCTTATTTCCTTTCATTTGGATAGCTGCTTCTTTGAGGAGAAGATATATGAGGGCTAAAAAGAAAGGGGATATAGAAAGCCTATCAAAGAAGGCTGCAGATATCGCCGAGGTGTTCACTTACAAGCAACTATCAAGGGCTACATGCAACTTCAGCCAGGAAAATCTTTTGGGAAGAGGTGCATTTGGTAGTGTTTATAAAGGTATCATATTAGACTCTGGAAAAACTGTAGCAGTAAAGAAGATTTCAGCAACTTCTAAGCAAGGTGAAAGAGAATTCTTAGCTGAAATATGTACCATAGGGCGTCTTAGGCACAAAAACTTAGTGAAGCTCCAGGGGTGGTGCAGTGAAGGCAATAATCTTCTCTTGGTTTATGACTACATGCAAAATGGAAGCCTTGATCACTTTATAGGCAAGGGCAGTCTGAACTGGCAAACCAGGCACAAGATATTGACAGGATTGGCATCAGCACTACTTTACCTTCATGAAGAGTGTGGAAACCCTTTTGTTCACAGAGATGTTAAGCCTAACAATGTCATGCTGGACTCTAATCACGATGCTCATTTGGGAGATTTTGGGTTAGCAAGATTACTCAAAAATGAAGGTTCAGTGACTACAAATCTAAATGGAACTCTAGGATATTTGGCTCCTGAACTAAGCTTTACAGGGAGAGCTACACCTGAATCAGATGTGTATAGCTTTGGCATGGTAGTTCTTGAGGTCACATGCGGGAAAAGGTTAAACTGGCTTAAGCAAGGGAACAGTTTTGTAGATTCTGTGTGGAATTTGCATTCTCAAAATGCATTGCTGGAGTGCGTTGACCAAAGACTAGAGAACAAATTTGATGAGGAAGAAGCTAAAAGGGCATTGATGGTTGGATTGGCATGTATGCATCCTGATTCCTTGTTCAGGCCAAGGATGAGAAAAGTGGTGAACATTTTTCAGAACCCAAATGAACCTTTAATGGAATTACCAGGAGTGAGGCCAACTGGAGTTTATGTATCAGTTTCTTCTAGTACATCAGCCTCCAACTCTAGCTCTAGAGGTGAGTTACAGATCCAATCATCCACAAAATCATCAGATGGAAAATTCAATTATGTGTGA 1983 0.4191 MFVIILLLLSNLLIQTQSGASTVVIDPNTFSFVTFTPESCTNGELLCMGSATAGNGYLSLTPEPQQSGNSSSSLSNTTNNVGRVLYPLPVNVWPAIISTTFTVRITPFSENSTGSGDGMALVFAQDNRPSPNASYGSYLGMFDQSTQGGGFQQIAVEMDTFMNEFDLDGNHIGIVTTSITNPLASESLNSSGIDLKSGRDIEVKIDYDGWSKMIFVSVGYSESQLKSVLNHSINLPDIVPSSIYVGFTASTGNTFPESHQVLNWVFTSVPLPILSAEHTKVGTIKTILVVVAVCLFPFIWIAASLRRRYMRAKKKGDIESLSKKAADIAEVFTYKQLSRATCNFSQENLLGRGAFGSVYKGIILDSGKTVAVKKISATSKQGEREFLAEICTIGRLRHKNLVKLQGWCSEGNNLLLVYDYMQNGSLDHFIGKGSLNWQTRHKILTGLASALLYLHEECGNPFVHRDVKPNNVMLDSNHDAHLGDFGLARLLKNEGSVTTNLNGTLGYLAPELSFTGRATPESDVYSFGMVVLEVTCGKRLNWLKQGNSFVDSVWNLHSQNALLECVDQRLENKFDEEEAKRALMVGLACMHPDSLFRPRMRKVVNIFQNPNEPLMELPGVRPTGVYVSVSSSTSASNSSSRGELQIQSSTKSSDGKFNYV 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00716 660 ProSiteProfiles Protein kinase domain profile. 344 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00716 660 Gene3D Phosphorylase Kinase; domain 1 303 420 - -
Gma20g00716 660 ProSitePatterns Protein kinases ATP-binding region signature. 350 374 IPR017441 GO:0005524
Gma20g00716 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Gma20g00716 660 SUPERFAMILY Protein kinase-like (PK-like) 330 637 IPR011009 -
Gma20g00716 660 Pfam Legume lectin domain 29 269 IPR001220 GO:0030246
Gma20g00716 660 Gene3D - 26 279 - -
Gma20g00716 660 Pfam Protein kinase domain 345 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00716 660 CDD lectin_legume_LecRK_Arcelin_ConA 30 268 IPR001220 GO:0030246
Gma20g00716 660 CDD STKc_IRAK 350 604 - -
Gma20g00716 660 SMART serkin_6 344 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00716 660 PANTHER - 286 639 - -
Gma20g00716 660 PANTHER - 73 270 - -
Gma20g00716 660 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 269 IPR013320 -
Gma20g00716 660 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 73 270 - -
Gma20g00716 660 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 286 639 - -
Gma20g00716 660 MobiDBLite consensus disorder prediction 637 660 - -
Gma20g00716 660 Gene3D Transferase(Phosphotransferase) domain 1 421 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00716 Gma-Chr20 27485149 27488658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00716 33 623 Receptor kinase-like Gene Family AT5G55830 37.984 8.12e-117 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma20g00716 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00716 - - gmx:102665030 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01183 10 33922808 33926275 Gma20g00716 20 27485149 27488658 GST