Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00691 ATGCAAAGTTCAATCTCACAATCTGAGATTTGCATCACTGATTACCTTCTACCCCAAGAAGTTCCATCTCAATTTCAATTTCCAGATATGAGCAACAATAACATACCAATGAACCATACCAACCTTCAAATGCCTCAAATCACATCTTTCTCCAAGCCTCCAAGGTCCTCATCAAATCTAAGCAACCGCAAACCGTCCTTGAGAAACATCACAATCCCTTCCATAACCTCAGATGAAACCAACAACATCAAAGAGAACAAGCACTATAGAGGGGTTAGAAGAAGGCCATGGGGCAAGTATGCTGCAGAAATCCGTGACCCTAATAGAAAAGGCTCAAGGGTGTGGCTTGGAACCTTTGACACAGCCATAGAAGCTGCCAAGGCTTATGACAAAGCTGCTTTCAAGATGAGAGGGAGCAAAGCCATATTGAATTTCCCTTTGGAGATTGGAGAGTCAGAGGAATCAGTCTCAAGCTGCATCAAGGTATCTGGCAGAGTTGATAGAAGAAAGATGACCACAATAGATTAG 528 0.428 MQSSISQSEICITDYLLPQEVPSQFQFPDMSNNNIPMNHTNLQMPQITSFSKPPRSSSNLSNRKPSLRNITIPSITSDETNNIKENKHYRGVRRRPWGKYAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDKAAFKMRGSKAILNFPLEIGESEESVSSCIKVSGRVDRRKMTTID 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00691 175 Pfam AP2 domain 88 138 IPR001471 GO:0003700|GO:0006355
Gma20g00691 175 SUPERFAMILY DNA-binding domain 88 148 IPR016177 GO:0003677
Gma20g00691 175 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 11 167 - -
Gma20g00691 175 ProSiteProfiles AP2/ERF domain profile. 88 146 IPR001471 GO:0003700|GO:0006355
Gma20g00691 175 MobiDBLite consensus disorder prediction 45 80 - -
Gma20g00691 175 SMART rav1_2 88 152 IPR001471 GO:0003700|GO:0006355
Gma20g00691 175 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 11 167 - -
Gma20g00691 175 MobiDBLite consensus disorder prediction 45 87 - -
Gma20g00691 175 Gene3D AP2/ERF domain 87 148 IPR036955 GO:0003700|GO:0006355
Gma20g00691 175 CDD AP2 87 146 IPR001471 GO:0003700|GO:0006355
Gma20g00691 175 PRINTS Ethylene responsive element binding protein signature 89 100 IPR001471 GO:0003700|GO:0006355
Gma20g00691 175 PRINTS Ethylene responsive element binding protein signature 128 148 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00691 Gma-Chr20 26693022 26694724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00691 34 175 AP2-EREBP Transcription Factor Family AT5G51190 51.389 1.62e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma20g00691 AP2 2.8e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00691 K09286 - gmx:100795866 307.76