Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00688 ATCTTAAGAAAGTTGAAGCATGGAAATATTATTCAAATGCTTGATTCCTTTGAAAGCCCGCAAGAATTTTGTGTTGTTACAGAATTTGCACAAGGTGAGCTATTTGAGATTCTTGAGGATGATAAGTGCCTTCCGGAAGAGCAAGTTCAAGCAATTGCAAAACAATTGGTAAAAGCCTTACATTATTTGCATTCCAATCGGATCATCCATCGCGATATGAAGCCCCAAAATATTCTAATTGGTGCTGGATCTGTTGTCAAGCTTTGTGATTTTGGGTTTGCACGTGCAATGTCCACAAATACAGTTGTTTTGCGATCTATAAAAGGCACTCCGTTGTACATGGCTCCAGAGCTTGTACGGGAACAACCATACAACCACACTGTAGATTTATGGTCTCTTGGTGTCATACTGTATGAGTTATTTGTAGGCCAACCTCCATTCTACACAAATTCTGTGTATGCTCTCATCAGACACATTGTTAAGGATCCTGTTAAATATCCAGATCGCATGAGTCCAAATTTCAAAAGCTTTTTAAAGGGTTTGCTTAACAAGGCACCAGAAAGTCGACTAACTTGGCCGGCTCTTCTTGAACACCCATTTGTTAAAGAAAGCTATGATGAACTCGAGGCCAGGGAATTGCGAGAGATAAATGGTTCACACATGCACAGTGATGCAGCACGGGTGGTTGAAGGAAAAACCATTCAAACTCTGACAACAGGCAAAAACAATCACATGGCAGGTATGGAAGCGCATATTGCTTCACCGCCTCAGAGTGCAGTTCAGTTAAATAGTCCTATCTTAGATAGAGCCAATTCTTCAGTGCTTGATGAGTCCCCAGTATTTTCAAATCAAAATGTAGGAGAGTCAGGCTGCCAAAGATTGGACAGACTTGAAAATAACTCTCGCACAGTCAACAGTGCAAAACTAATTGGCCAAGACAATGAAGCATTGGGACATATTCTGCTACCACTGAAAAAATGGTCAAAAGGATCTCAAAATATTTGCAGtgatcaaGATGTTCCTGAATCAAACCAGTCATTGAGGATTCTCTCAAACCTAGTTGCAGCTGGTGCTTTCAGTTCTAGTGGACTAATAGATGAACTAATACGAGAGCTCCTTGTGTTTACTGGATCTGTTATTGCCATGAAATCCTCCGAAGTTACTGACTTGATGGCAAAGAGTTTCTCCATCACTAAAATTTTGCTCGATAATGGTGGAAGTTGCACTTCAAGCTCTTATCTAAGTCACTGGGTTGAATTTGTTGAGATCTATTCTCAGGTTGTAACTTCAAATAATGATGCATCTGGAAGAGTTCTGTATGAATCTAGTGCTTGCATTACAGTCATGCTGTCTAGAGTTGCTCAGGTGCTTAGATCATCTCCTAAAATTTCAGGCCAAGAGAAACTGAATGAAACTGCTAACCGAATTTTAGAGCATGCAAAAACAACGGGTTTAGTAGACAATTTGTGTCTGTGTTTAGCCACTTCAGGATCGAGTCTTATTACAGGTTCTTCCAATATGCTACGGGCTGCTTCTGAAGCATGCAGAGCTGTCTGGTGTTTGATTAATGCACTGGATATACTTTTTATGAAGAAAAGTGCCATTCTGTTTCCCATTAATGCTTTACAGAGTCATTCTTTGCATAGGATGGAAGTTGTGCATCATGAGCAAGATCTCTTGGATAAAGCAGATTCAACTAAAGTTGTTGATGCAATGACCAGAGCATTCCTGAGATCTAAAGCTGTTCTGGTTGCTGTTTACTATTGTTTTCACCAACAACTTGAGTCTGCAATGAATTGTGGTCTTCAGCTTTTGTCAAGATGCTGTCTACATAACAGAATTGTTCCTGCTCTCCTTTGTGGTCTTCCCAGTTCCCTTCCCGTGACTACTGTTGTTAGTGGTGGTGGTGATGGAACTATTGTTTCAGAAGTTTTCACTGTCTTATCATTATGCAGTTCCCCTGCTAACAAAGACACACAAAGTGTAGAACCAAGTAATGCCAAGTGCAAATTAACAAATCCTTCTGCTCTGGTTCGTCATTCATGTCTCCTTGTTGCAGTAATTGCTCAGTGTTTGAAGTCATCTGGAAGAAATTCAGCAATTTTTATGCTCACTACCTCACCAAAGAAGCAGCTTGCTCGACTATCAGTGTTTGCTCACCAAATTTCTTCTGATGATAAAATAAAAGCCTCTATTGAGCCTCAAAGTGCATCAGCTATGTTGGCTCTGGCATCCATTCTATCCCTTGAATCAGGGGCTTTGGTTGAGTCTCCAATATCTGAAATTGCTTTGCCTTTAATTCCTCGAACTTCTAAACTAAGTGACCATCTTAAATTTTCATCTGGCAATGTAAATGAATCGGACCCTTGCAACATCAGTGGGAAGCTCTCATATTGGCAAGGGGTAAGAGATGGGTGTGTTGGTCTTTTAGATTCCAGACTCAAGTGGGGAGGACCATTAGCTGTTCAGCAGTTGTGTGCAAGTGGTACTCCTCTACTTCTTATGGGCCTATTAGGCAATGATGTTTTAAATGCTTCTCATGGAAATGACCATGTAAATGATAGAGTTGGATTGTCTCCTATTGGTGTTGTATGGACAATTTCATCATTATGTCATTGTCTTTCTGGTGGTGCTTTGACTTATCGTCAAATTTTGATTAGGAATGAACATATTAAACTCTTTTCCAACTTGATATGCGACGTTCATATCAATTTGGTAAAATGCTGGATCGGACCTGGTGGAGGGAGAGCAGGAGTCAGAGATCTAATAAATGCAGTGATAGATCTCTTAGCATTTCCTTTTGTTGCTCTGCAAAATGCACCTGGCTTGCCATCAGCCACTGCTTCTGTCAGCAGTGGGTTTCTTCTTAATATTGGCTCTCCTGGTCAGAGAGTATGCATGGAAGATAAGGGTATAGTTAAGGCAATCGAAGAAGACATAGGAAAATATATTAAGATTCTTGTAGAGGTGGGTGTGCCTGGTATTATCCTTCGATGCCTAGATCATATGGATTTGAATGATTTGGGCAGGCCTGTTGCTTTTCTGGCTAAAATGGTATGCCACCGACCTTTAGCAATCCAACTTGTTAGTAAAGGTCTTCTGGATCCAAATAAGATGAGAAAGTTGTTTGACTGTTCGGCCCCAAAAGAGGTCACACTGGATGCTCTTATGATTATTTCTGATCTTGCTCGCATGGACAAGGGATTTTATGAGTACATTAAAGGTGCTTCTGTTTTGGAGTTCTTGAAAGATTTTCTTTTGCATGAGGATCCCAATATGCGTGCCAAAGCTTGCAGTGCTCTTGGAAACATGTGTCGTCATAGCGCCTATTTTTATAGTTCACTTGCAAGACATCAAATTGTTGGTATCCTTATTGAAAGATGTTCTGATCCAGACAAACGAACACGGAAATTTGCTTGTTTTGCTATTGGAAACGCGGCCTACCACAATGACTTGTTGTATGAAGAGCTGAGGAAATCTATTCCTCAATTGGCAAATTTGTTACAAATGGCAGAGGAAGACAAGACTAAGGCAAATGCAGCAGGTGCACTTAGCAATCTGGTTCGCAACTCTGACAAGCTTTGTGAAGACATTGTGTCTAACGGAGCGGTTCAGTCTCTGCTGAAACTAATTTCCGATTGTGCGGTATCAGCGCTCAATCCAAGCAGAAATGATTCAGGAAATGAATCTCCTCTAAAGATAGCTCTCTTTTCCCTAGCAAAGATGTGTGCACATCCACTCTGCAGACAGTTCATCCGTTCATCACCATTGTTCCCTGTGATTGGAAGGCTTCAGCAGTCTCCAGAATCATCCATTGCCAAATATGCCTCCGCGATCATTAGCAAAGTTGCTGAACCTTGA 3861 0.4087 ILRKLKHGNIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVKALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDRMSPNFKSFLKGLLNKAPESRLTWPALLEHPFVKESYDELEARELREINGSHMHSDAARVVEGKTIQTLTTGKNNHMAGMEAHIASPPQSAVQLNSPILDRANSSVLDESPVFSNQNVGESGCQRLDRLENNSRTVNSAKLIGQDNEALGHILLPLKKWSKGSQNICSDQDVPESNQSLRILSNLVAAGAFSSSGLIDELIRELLVFTGSVIAMKSSEVTDLMAKSFSITKILLDNGGSCTSSSYLSHWVEFVEIYSQVVTSNNDASGRVLYESSACITVMLSRVAQVLRSSPKISGQEKLNETANRILEHAKTTGLVDNLCLCLATSGSSLITGSSNMLRAASEACRAVWCLINALDILFMKKSAILFPINALQSHSLHRMEVVHHEQDLLDKADSTKVVDAMTRAFLRSKAVLVAVYYCFHQQLESAMNCGLQLLSRCCLHNRIVPALLCGLPSSLPVTTVVSGGGDGTIVSEVFTVLSLCSSPANKDTQSVEPSNAKCKLTNPSALVRHSCLLVAVIAQCLKSSGRNSAIFMLTTSPKKQLARLSVFAHQISSDDKIKASIEPQSASAMLALASILSLESGALVESPISEIALPLIPRTSKLSDHLKFSSGNVNESDPCNISGKLSYWQGVRDGCVGLLDSRLKWGGPLAVQQLCASGTPLLLMGLLGNDVLNASHGNDHVNDRVGLSPIGVVWTISSLCHCLSGGALTYRQILIRNEHIKLFSNLICDVHINLVKCWIGPGGGRAGVRDLINAVIDLLAFPFVALQNAPGLPSATASVSSGFLLNIGSPGQRVCMEDKGIVKAIEEDIGKYIKILVEVGVPGIILRCLDHMDLNDLGRPVAFLAKMVCHRPLAIQLVSKGLLDPNKMRKLFDCSAPKEVTLDALMIISDLARMDKGFYEYIKGASVLEFLKDFLLHEDPNMRAKACSALGNMCRHSAYFYSSLARHQIVGILIERCSDPDKRTRKFACFAIGNAAYHNDLLYEELRKSIPQLANLLQMAEEDKTKANAAGALSNLVRNSDKLCEDIVSNGAVQSLLKLISDCAVSALNPSRNDSGNESPLKIALFSLAKMCAHPLCRQFIRSSPLFPVIGRLQQSPESSIAKYASAIISKVAEP 1286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00688 1286 PANTHER PROTEIN KINASE RELATED 1 1284 IPR045193 GO:0004674
Gma20g00688 1286 SUPERFAMILY ARM repeat 979 1283 IPR016024 -
Gma20g00688 1286 SMART arm_5 1066 1106 IPR000225 GO:0005515
Gma20g00688 1286 SMART arm_5 1190 1244 IPR000225 GO:0005515
Gma20g00688 1286 SMART arm_5 1150 1189 IPR000225 GO:0005515
Gma20g00688 1286 Gene3D - 982 1283 IPR011989 -
Gma20g00688 1286 Coils Coil 1154 1174 - -
Gma20g00688 1286 CDD STKc_STK36 1 201 - -
Gma20g00688 1286 ProSiteProfiles Protein kinase domain profile. 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00688 1286 SMART serkin_6 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00688 1286 SUPERFAMILY Protein kinase-like (PK-like) 1 218 IPR011009 -
Gma20g00688 1286 Pfam Protein kinase domain 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00688 1286 Gene3D Transferase(Phosphotransferase) domain 1 1 262 - -
Gma20g00688 1286 ProSitePatterns Serine/Threonine protein kinases active-site signature. 68 80 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00688 Gma-Chr20 26545104 26559763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00688 1 214 AGC Kinase Gene Family AT3G08720 38.009 1.46e-34 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Gma20g00688 Pkinase 1.8e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00688 K06228 - gmx:100813995 2425.97