Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00684 ATGGATGTGCGAACCGTGACAAATGCGTTTGCATTGTCAACAATGGTGGGAGAATGTCGTATGACTGTAAAAAAAGACTTGCTTCTCCCATGGAATCATCGCCTATTTACGGGTGTGGCCCTTCTTGCAAGTGCTCCTCGATCTTCTTGCATCAACCGAGTAGGCCAGCATGGTATCCAGTTCCAACTTGAAATCTTCATGACAAAATTGAAAGGTTGGGGTGTTAGAACACGCTCTTTCATTCCCTCTGGAAGCTTTGTATGTCAGTACATTGGAGAAGTCGGTGACAGAAGACAAAGTGGATCGAGGCTAGCTAGTGATGATGACTATTTATTTCACATGGGTGATGGAAAGGGCTTCATTAATGCAGCAAAAAGTGGAAACATTGGAAGAAAAGATATCCATAATCATTGCCACTTCATACCATAA 429 0.4289 MDVRTVTNAFALSTMVGECRMTVKKDLLLPWNHRLFTGVALLASAPRSSCINRVGQHGIQFQLEIFMTKLKGWGVRTRSFIPSGSFVCQYIGEVGDRRQSGSRLASDDDYLFHMGDGKGFINAAKSGNIGRKDIHNHCHFIP 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00684 142 PANTHER - 24 135 - -
Gma20g00684 142 Gene3D SET domain 13 139 IPR046341 -
Gma20g00684 142 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 24 135 - -
Gma20g00684 142 SUPERFAMILY SET domain 48 131 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00684 Gma-Chr20 26408355 26408856 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00684 43 112 Su(var)3-9 homologs AT5G04940 42.857 4.17e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00684 - K11420 gmx:100807574 144.821