Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00675 ATGAAGTGGGAAAGTATAACCCTCTCTTCTCCTACACCTTGCACTCCAAACTCCAACACCAATTGGTTGGTGATGGAGGATAATAATAGAAGCAGCACAAAATGGACCTCTGAAGACAAGAAGCTCTTTGAAAATGCTCTTGCAGTGCATGATAAGGACACCCCAGATCAGTGGCACAAAGTGGCTAAGATGATTCTCGGAAAGATAGTGGTTGATGTGATAAGGAAGTACAAGGAGTTGGAAGTAGATATTAGCAATATAGAAACTGTTTTGATTCCAGTTCCTGGCTATAGTAGCATTGCTACCTCACCTTTCACCTTAGATTGGGTGAACACTCATGGGTATGATGGGTTTAAAGGATATGGAAAGAGATCTTCCTCACTGAGACCAATTGAGCATGAAAGGAAGAAAGGAGTGCCTAGGACTGAAGATGAACATAAAACTGGTGGATGGAGTTTAAAGTTAATAGGTGTATGGACAAGAATTCTATATTTGGAGTTTGAACTTCCCTTTAATGTTCCCTGCATATTGTTTCTATTGGGTCTGAAGAAGTATGGGAAAGGTGATTGGACAAATATATGTTGCAATTTTGTTATTACAAGAACTCCAACACAGGTTGGTAGTCATGCTCAGAAGTACTTCATAAGGCAGCTTTCAGGAGGCAAAGACAAAAGCAGGGCAAGCATACATGACAAAACAACAGTGAATCTCACAGAAACCATAACAACTTCTTCAGAAGACACCAATAGATCCACTTCACCACATGTGCTCTCAAGCAACAACAGCCAAATTCTACTCCTACTACACCAAGAACTCGTTTTCAATGGAGTAGCCTTTGATTCGAATTTTGCTCCTTGTCTAGTTGTAGCCTTGT 874 0.405 MKWESITLSSPTPCTPNSNTNWLVMEDNNRSSTKWTSEDKKLFENALAVHDKDTPDQWHKVAKMILGKIVVDVIRKYKELEVDISNIETVLIPVPGYSSIATSPFTLDWVNTHGYDGFKGYGKRSSSLRPIEHERKKGVPRTEDEHKTGGWSLKLIGVWTRILYLEFELPFNVPCILFLLGLKKYGKGDWTNICCNFVITRTPTQVGSHAQKYFIRQLSGGKDKSRASIHDKTTVNLTETITTSSEDTNRSTSPHVLSSNNSQILLLLHQELVFNGVAFDSNFAPCLVVAL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00675 291 SUPERFAMILY Homeodomain-like 177 217 IPR009057 -
Gma20g00675 291 SUPERFAMILY Homeodomain-like 33 81 IPR009057 -
Gma20g00675 291 Gene3D - 176 218 - -
Gma20g00675 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 181 218 IPR017930 -
Gma20g00675 291 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 177 258 IPR043363 -
Gma20g00675 291 SMART sant 167 216 IPR001005 -
Gma20g00675 291 SMART sant 31 83 IPR001005 -
Gma20g00675 291 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 5 154 IPR043363 -
Gma20g00675 291 CDD SANT 34 80 IPR001005 -
Gma20g00675 291 Gene3D - 26 94 - -
Gma20g00675 291 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 177 217 IPR006447 GO:0003677
Gma20g00675 291 PANTHER MYB TRANSCRIPTION FACTOR MYB51 5 154 - -
Gma20g00675 291 PANTHER MYB TRANSCRIPTION FACTOR MYB51 177 258 - -
Gma20g00675 291 CDD SANT 177 214 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00675 Gma-Chr20 26211863 26213352 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma20g00675 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00675 - - gmx:778067 394.045